RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Wnk1P83741 2377 aa11.55□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 2310009B15RikA0A0A6YWI4 143 aa11.55□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Znf575Q3TXZ1 239 aa11.55□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Defb39Q70KL3 74 aa11.54□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Fgfbp3Q1HCM0 245 aa11.54□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Pou2af1Q64693 256 aa11.54□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 C130032M10RikQ8C888 123 aa11.53□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Tmem213Q08EA8 116 aa11.52□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Timm17bQ9Z0V7 172 aa11.52□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Gm28374F6SG70 93 aa11.51□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Q8K1L6 76 aa11.5□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Gm6899Q3USS0 134 aa11.5□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Ifitm6A0A1B0GS75 124 aa11.5□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Smim1P0C8K7 78 aa11.5□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Jmjd1cQ69ZK6 2350 aa11.48□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Cdc42se2Q8BGH7 84 aa11.48□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 CrygeQ03740 174 aa11.47□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Chchd7Q8K2Q5 85 aa11.47□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Igkv8-19A0A0G2JFN8 121 aa11.46□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Serp2Q6TAW2 65 aa11.46□□□□□ -0.57
Gtf3c4-204ENSMUST00000171404 Sox16Q62247 57 aa11.45□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Gm26566Q8CAC1 153 aa11.45□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Gm20604F8WIA3 75 aa11.45□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Gm10509O88255 85 aa11.45□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Sorl1O88307 2215 aaKnown RBP11.44□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 A930009A15RikG3UYI6 118 aa11.44□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Ypel4Q65Z93 127 aa11.44□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 CtrlQ9ER05 264 aa11.43□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Cd164l2Q9D6W7 172 aa11.42□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Gm9922Q8C3P1 144 aa11.42□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 C2cd3Q52KB6 2323 aa11.42□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 SrarpQ3ULG3 163 aa11.42□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 B230217C12RikE9Q3Z1 139 aa11.41□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Ighv1-56A0A0A6YXG2 117 aa11.41□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Gm16485Q8C4B7 115 aa11.41□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 1700056E22RikF7CNM6 234 aa11.4□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Ep300B2RWS6 2412 aa11.4□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Gm5142Q8C5X9 133 aa11.4□□□□□ -0.58
Gtf3c4-204ENSMUST00000171404 Polr2kQ63871 58 aa11.39□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Gm10577Q3UDV9 132 aa11.38□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 SonQ9QX47 2444 aaKnown RBP11.37□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Ighv2-9A0A075B5Q5 116 aa11.37□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Cd27P41272 250 aa11.37□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Gm17509Q9CZ61 145 aa11.37□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Dido1Q8C9B9 2256 aaKnown RBP11.36□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Gm10322F7D7I4 111 aa11.36□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Sec16aA2AIX1 2377 aa11.36□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 4930519P11RikQ9CUJ8 166 aa11.36□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 4930556J24RikQ9D4U7 146 aa11.36□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Notch3Q61982 2318 aa11.35□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Dopey1Q8BL99 2399 aa11.35□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Ighv2-9-1A0A075B697 116 aa11.35□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Gm10570F6VB42 170 aa11.34□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Gm3443F7CCV5 94 aa11.34□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Gm10300Q8C8P7 189 aa11.33□□□□□ -0.59
Gtf3c4-204ENSMUST00000171404 Col5a1O88207 1838 aa11.33□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 4930432M17RikQ3V0W9 174 aa11.32□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 Ighv8-13A0A075B5Y0 101 aa11.32□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 Gm5153P01627 120 aa11.31□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 Sprr2jO70561 109 aa11.31□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 4930524J08RikQ9CUJ5 163 aa11.3□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 Col27a1Q5QNQ9 1845 aa11.3□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 Pla2g2eQ9QUL3 142 aa11.29□□□□□ -0.6
Gtf3c4-204ENSMUST00000171404 Gm3285A0A1W2P7U0 201 aa11.27□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Gm28230A0A0A0MQ91 144 aa11.26□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 SnurfQ9WU12 71 aa11.26□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Defb37Q7TMD2 62 aa11.25□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 SrcapA0A087WQ44 3271 aa11.25□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Gm10135F6TEE5 83 aa11.25□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Gm10642Q3TWM1 71 aa11.24□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Bean1Q9EQG5 255 aa11.24□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Cspg4Q8VHY0 2327 aa11.24□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 A730009L09RikA0A1B0GS82 72 aa11.23□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Gm17606F6ZL36 78 aa11.22□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Reg3aO09037 175 aa11.22□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 UqcrqQ9CQ69 82 aa11.22□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Zfand2aQ9JII7 171 aa11.22□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 CnfnQ6PCW6 111 aa11.21□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Spg11Q3UHA3 2430 aa11.21□□□□□ -0.61
Gtf3c4-204ENSMUST00000171404 Q9DAA7 145 aa11.21□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Gm10337F7DEP7 55 aa11.2□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Cd164Q9R0L9 197 aa11.2□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Krtap27-1E9PX37 202 aa11.19□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Prr9Q8BV84 116 aa11.19□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Gm5464Q3UY29 175 aa11.19□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Ntn5Q3UQ22 452 aa11.19□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Spink13Q3UTS8 97 aa11.18□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Defb11Q8R2I7 77 aa11.18□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Defb1P56386 69 aa11.17□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Srsf12Q8C8K3 266 aa11.17□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 1700018G05RikA0A1B0GSI2 66 aa11.17□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 RetnlbQ99P86 105 aa11.17□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Odf3l2Q3TZ65 277 aa11.16□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Znf580Q9DB38 172 aa11.16□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Gm19935A0A1B0GSF9 52 aa11.16□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Brwd1Q921C3 2304 aa11.15□□□□□ -0.62
Gtf3c4-204ENSMUST00000171404 Gm10845Q3UNY9 185 aa11.14□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Mrpl34Q99N91 92 aa11.14□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Col4a2P08122 1707 aa11.14□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 NbasE9Q411 2356 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms