RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Ifi27l2bQ8VC49 283 aa12.09□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Cend1Q9JKC6 149 aa12.09□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Gm4064A0A087WR82 380 aa12.08□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Ighv1-56A0A0A6YXG2 117 aa12.08□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Igkv4-92A0A0B4J1I2 117 aa12.08□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Ctxnd2A0A1B0GQX3 59 aa12.08□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Gm10352B2RWR6 380 aa12.08□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Rbmy1a1O35698 380 aa12.08□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Rbmy1bQ60990 380 aa12.08□□□□□ -0.47
Vti1b-201ENSMUST00000055262 Fam240aJ3QNP9 97 aa12.08□□□□□ -0.48
Vti1b-201ENSMUST00000055262 P01823 113 aa12.08□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Ube2wQ8VDW4 151 aa12.08□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Mustn1Q99JI1 82 aa12.08□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Foxi2Q3I5G5 311 aa12.07□□□□□ -0.48
Vti1b-201ENSMUST00000055262 IqcjQ8BPW0 110 aa12.07□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Tmem86bQ497J1 226 aa12.06□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Dync1h1Q9JHU4 4644 aaKnown RBP12.05□□□□□ -0.48
Vti1b-201ENSMUST00000055262 P01837 106 aa12.05□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Gm10837Q3UTT8 145 aa12.05□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Cox7b2Q9D2H1 82 aa12.05□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Fgf23Q9EPC2 251 aa12.05□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Igkv8-24A0A140T8P5 121 aa12.04□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Cox8cA6H666 72 aa12.04□□□□□ -0.48
Vti1b-201ENSMUST00000055262 4930519P11RikQ9CUJ8 166 aa12.04□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Pgpep1Q9ESW8 209 aa12.04□□□□□ -0.48
Vti1b-201ENSMUST00000055262 PpdpfQ9CR37 115 aa12.03□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Cks1bP61025 79 aa12.02□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Prelid3aQ8VE85 172 aa12.02□□□□□ -0.48
Vti1b-201ENSMUST00000055262 Trav8-1A0A075B641 109 aa12.02□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Defa9P50707 93 aa12.02□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Sprr4Q8CGN8 76 aa12.02□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Stard9Q80TF6 4561 aa12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Dnah5Q8VHE6 4621 aa12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Krtap13O88375 197 aa12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Rpl13aP19253 203 aaKnown RBP12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Gm10735Q3US96 136 aa12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Gm5148Q8BGG2 154 aa12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Ndufc2Q9CQ54 120 aa12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Tspo2Q9CRZ8 162 aa12.01□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Pmp2P24526 132 aa12□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Cks1brtQ3UNC9 96 aa12□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Defb50Q6TU36 73 aa11.99□□□□□ -0.49
Vti1b-201ENSMUST00000055262 A730009L09RikA0A1B0GS82 72 aa11.98□□□□□ -0.49
Vti1b-201ENSMUST00000055262 1500009C09RikD3YYW9 81 aa11.98□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Hsbp1l1B2RXB2 72 aa11.97□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Gm9242J3QNY1 357 aa11.97□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Sprr1aQ62266 144 aa11.97□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Hnrnpa3Q8BG05 379 aaKnown RBP11.97□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Dppa2Q9CWH0 301 aa11.97□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Hrct1Q9D6B9 109 aa11.97□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Gm20730A0A075B5J6 119 aa11.96□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Ca1P13634 261 aa11.96□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Gm10604Q3V0X7 143 aa11.96□□□□□ -0.49
Vti1b-201ENSMUST00000055262 Mzt1Q8BUR9 78 aa11.96□□□□□ -0.49
Vti1b-201ENSMUST00000055262 9430015G10RikA2ASP7 199 aa11.95□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Camk2n2Q78WH7 79 aa11.95□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Pam16Q9CQV1 125 aa11.95□□□□□ -0.5
Vti1b-201ENSMUST00000055262 1700012A03RikQ9DAF1 130 aa11.95□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Scgb1b10A0A087WPW0 93 aa11.95□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Gm42674D3YUT9 64 aa11.94□□□□□ -0.5
Vti1b-201ENSMUST00000055262 AponG3X9D6 251 aa11.94□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Isg15Q64339 161 aaKnown RBP11.94□□□□□ -0.5
Vti1b-201ENSMUST00000055262 4930442H23RikQ9D5G7 103 aa11.94□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Igkv3-2A0A075B5P0 119 aa11.93□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Gm867A0A1W2P7T4 151 aa11.93□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Defa10P50708 93 aa11.93□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Trappc1Q5NCF2 145 aa11.93□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Iglc1A0A0G2JE99 106 aa11.92□□□□□ -0.5
Vti1b-201ENSMUST00000055262 P01755 137 aa11.92□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Tcl1b5P56845 121 aa11.92□□□□□ -0.5
Vti1b-201ENSMUST00000055262 BB014433Q8C5R5 389 aa11.92□□□□□ -0.5
Vti1b-201ENSMUST00000055262 2310009B15RikA0A0A6YWI4 143 aa11.91□□□□□ -0.5
Vti1b-201ENSMUST00000055262 C530025M09RikF6RGA8 229 aa11.91□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Plac1Q9JI83 173 aa11.91□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Mc5rP41149 325 aa11.9□□□□□ -0.5
Vti1b-201ENSMUST00000055262 SrarpQ3ULG3 163 aa11.9□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Morn5Q9DAI9 170 aa11.9□□□□□ -0.5
Vti1b-201ENSMUST00000055262 SacsQ9JLC8 4582 aa11.9□□□□□ -0.5
Vti1b-201ENSMUST00000055262 Trav4-3A0A0B4J1K1 110 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Trav14-1A0A0G2JF94 121 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Gm17577J3QNF7 156 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 CrxO54751 299 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 PkigO70139 76 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 4930432M17RikQ3V0W9 174 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Erg28Q9ERY9 140 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Hbb-bsA8DUK4 147 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Hbb-b1P02088 147 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 P0C913 63 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Tnp2P11378 117 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Hist2h2beQ64524 126 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Gm5868Q8BJG1 145 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Gm9903Q8C9Y8 129 aa11.89□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Gm6812B1AXU1 112 aa11.88□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Rmi2Q3UPE3 149 aa11.88□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Trav4n-4A0A075B615 110 aa11.87□□□□□ -0.51
Vti1b-201ENSMUST00000055262 SycnQ8VCK7 134 aa11.87□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Fat1A0A1L1SQU7 4645 aa11.87□□□□□ -0.51
Vti1b-201ENSMUST00000055262 B230359F08RikA0A0B4J1K3 109 aa11.86□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Trav9d-4A0A0G2JG37 103 aa11.86□□□□□ -0.51
Vti1b-201ENSMUST00000055262 Gm11627A6PWP4 55 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms