RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Gm10772F7AIG4 85 aa10.38□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Gm5142Q8C5X9 133 aa10.38□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Trav13-1A0A075B644 110 aa10.37□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Gm11565A2A4M7 156 aa10.37□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Tmem86bQ497J1 226 aa10.37□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 PrlhG3UWC3 86 aa10.37□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Srsf12Q8C8K3 266 aa10.37□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Bles03Q8VD62 251 aa10.37□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Rpl39lQ9CQD0 51 aa10.36□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Ube2d4D3YUH6 135 aa10.35□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Cox7a1P56392 80 aa10.35□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Gm10845Q3UNY9 185 aa10.35□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Tmem223Q9CQE2 199 aaKnown RBP10.35□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Gm7075D3Z497 112 aa10.35□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 GhrhP16043 103 aa10.34□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 4930535I16RikQ9CUI2 172 aa10.34□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Lypd5Q9D7Z7 256 aa10.34□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Q9DAA7 145 aa10.34□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 SonQ9QX47 2444 aaKnown RBP10.34□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Notch3Q61982 2318 aa10.34□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Chd9Q8BYH8 2885 aa10.33□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Gm8439G3UWA7 96 aa10.33□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Defa23Q5G866 93 aa10.33□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 NbeaQ9EPN1 2936 aa10.33□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Chchd7Q8K2Q5 85 aa10.33□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 AcacbE9Q4Z2 2448 aa10.32□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Tomm7Q9D173 55 aa10.32□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Krtap16-1A2A5X5 502 aa10.31□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 E130208F15RikQ3UPV3 143 aa10.31□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Fam19a1Q7TPG8 133 aa10.31□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 EnhoQ8K1D8 76 aa10.31□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Gm10308Q9CVR5 141 aa10.31□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Lrrk2Q5S006 2527 aa10.31□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Fam19a5Q91WE9 132 aa10.31□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Pkd1l2Q7TN88 2461 aa10.3□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Gpha2Q925Q5 128 aa10.3□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Igkv2-109A0A075B5K6 120 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Igkv4-72A0A0B4J1I4 117 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 9430015G10RikA2ASP7 199 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 LystP97412 3788 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Gm9195A0A140LHT4 2805 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Ighv10-3A0A075B5T6 119 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Igkv8-21A0A140T8P7 120 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Gm7257D3YX25 99 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Ormdl1Q921I0 153 aa10.29□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 NrgnP60761 78 aa10.28□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Rnase1P00683 149 aa10.28□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 H2al1aQ5M8Q2 105 aa10.28□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Ighv1-59A0A0A6YXE0 117 aa10.27□□□□□ -0.76
Ushbp1-201ENSMUST00000049184 Igkv8-18A0A0B4J1J3 123 aa10.27□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Gm5153P01627 120 aa10.27□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Gm9903Q8C9Y8 129 aa10.27□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 B230307C23RikQ8BLB2 64 aa10.26□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Ubl5Q9EPV8 73 aa10.26□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Tcl1b3P56842 122 aa10.26□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Abca2P41234 2434 aa10.26□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Celsr2Q9R0M0 2920 aa10.25□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Ighv2-9A0A075B5Q5 116 aa10.25□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Rpl35aO55142 110 aa10.25□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 MplkipQ9D011 178 aa10.25□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Gm43218A0A0G2JGT0 114 aa10.24□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Klk12B2RVZ0 247 aa10.24□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Ighv13-2A0A0A6YWN3 119 aa10.24□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Brk1Q91VR8 75 aa10.24□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 OtoglF7A4A7 2325 aa10.23□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Fam229bQ8CF36 80 aa10.23□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Gcn1E9PVA8 2671 aaKnown RBP10.23□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 OtogO55225 2910 aa10.22□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Itpr3P70227 2670 aa10.22□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Trav13-2A0A075B649 110 aa10.22□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Igkv8-27A0A0G2JF28 120 aa10.22□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Igkv8-30A0A140T8M3 121 aa10.22□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Sprr1bQ62267 153 aa10.22□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Inafm2A0A1L1STD6 152 aa10.22□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Igkv4-53A0A0G2JFC6 119 aa10.21□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 P01819 144 aa10.21□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Odf3l2Q3TZ65 277 aa10.21□□□□□ -0.77
Ushbp1-201ENSMUST00000049184 Igkv8-26A0A075B5N5 123 aa10.21□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Gm9913Q8BQQ2 135 aa10.21□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 NbasE9Q411 2356 aa10.2□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Pla2g1bQ9Z0Y2 146 aa10.2□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Helz2E9QAM5 2947 aaKnown RBP10.2□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Gm10320E9PW43 113 aa10.19□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Defb18Q30KP5 85 aa10.19□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Ep300B2RWS6 2412 aa10.19□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Spink4O35679 86 aa10.19□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 CnbpP53996 178 aaKnown RBP10.19□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 C530025M09RikF6RGA8 229 aa10.18□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Lyrm9Q3UN90 78 aa10.18□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 2010109I03RikQ9CQ11 111 aa10.18□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 BikO70337 150 aa10.17□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Mapk1ip1lQ8BH93 242 aa10.17□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Igkv4-58A0A0G2JGI6 119 aa10.17□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Prh1P05142 261 aa10.17□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Ighv2-5A0A0A6YY69 116 aa10.16□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 BaalcQ8VHV1 145 aa10.16□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 SnurfQ9WU12 71 aa10.16□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Ndufc1Q9CQY9 76 aa10.15□□□□□ -0.78
Ushbp1-201ENSMUST00000049184 Trbv13-2A0A140T8N6 113 aa10.15□□□□□ -0.79
Ushbp1-201ENSMUST00000049184 CrygeQ03740 174 aa10.15□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms