RNA–Protein interactions for RNA: ENSMUST00000197984.4

Smarcc1-204, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 3,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-204ENSMUST00000197984 Lmo4P61969 165 aa11.36□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 PemtQ61907 199 aa11.35□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Synj2bpQ9D6K5 145 aa11.35□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Dynlrb2Q9DAJ5 96 aa11.35□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Gm10490F6VBM2 120 aa11.34□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Pip4p1Q3TWL2 284 aa11.34□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Gm5089A1L3C8 106 aa11.34□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Ang3P97802 145 aa11.34□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Sostdc1Q9CQN4 206 aa11.34□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 FlncQ8VHX6 2726 aaKnown RBP11.34□□□□□ -0.59
Smarcc1-204ENSMUST00000197984 Utp20Q5XG71 2788 aaKnown RBP11.33□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Igkv4-78A0A0A6YYE5 119 aa11.33□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Ndufa12Q7TMF3 145 aaKnown RBP11.33□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Trav13n-2A0A0G2JF93 110 aa11.33□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Trav13-4-dv7A0A075B6C2 110 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 3110070M22RikQ9DAQ7 118 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 MalO09198 153 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Ifitm1Q9D103 106 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 B230359F08RikA0A0B4J1K3 109 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Shisa2Q8QZV2 295 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Ube2e2Q91W82 201 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 LrbaQ9ESE1 2856 aa11.32□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Tmem86bQ497J1 226 aa11.31□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Ighv2-3A0A075B696 115 aa11.31□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Gm7257D3YX25 99 aa11.31□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 B230217C12RikE9Q3Z1 139 aa11.3□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Dmbt1Q60997 2085 aa11.3□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Ighv2-6-8A0A0A6YWY9 116 aa11.3□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Usmg5Q78IK2 58 aa11.3□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Brk1Q91VR8 75 aa11.3□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 MplkipQ9D011 178 aa11.3□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Gm10647E9Q8X0 124 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 7530416G11RikJ3QJX6 159 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Pla2g2aP31482 146 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Muc2Q80Z19 2680 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Wfdc15aQ8BH89 80 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 1700011M02RikB1AX35 88 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 P04219 140 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 B230307C23RikQ8BLB2 64 aa11.29□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Gm815Q3UWS2 115 aa11.28□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Prr9Q8BV84 116 aa11.28□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 4930442H23RikQ9D5G7 103 aa11.28□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 1700010B08RikQ9DAI7 102 aa11.28□□□□□ -0.6
Smarcc1-204ENSMUST00000197984 Ighv1-11A0A0A6YWI9 117 aa11.27□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Trav13-1A0A075B644 110 aa11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 TrrapQ80YV3 2565 aaKnown RBP11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Igkv4-79A0A075B5L8 119 aa11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Reg3gO09049 174 aa11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Igkv4-62A0A0G2JDW9 117 aa11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Samd13D3YUG0 102 aa11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Lelp1Q9DAE3 120 aa11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Timm17bQ9Z0V7 172 aa11.26□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Prh1P05142 261 aa11.25□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Gm9925F6T2U3 160 aa11.25□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 P01729 129 aa11.25□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Rpl36aP83882 106 aaKnown RBP11.25□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Usp24B1AY13 2617 aaKnown RBP11.24□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Igkv4-69A0A0B4J1I6 116 aa11.24□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Spata25Q9DA57 226 aa11.24□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Hivep3A2A884 2348 aa11.24□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Klk1b4P00757 256 aa11.24□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Ighv1-62-1A0A075B5U3 116 aa11.23□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Defa20Q45VN2 95 aa11.23□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 LystP97412 3788 aa11.23□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 FshbQ60687 130 aa11.23□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 4930524J08RikQ9CUJ5 163 aa11.23□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 MtorQ9JLN9 2549 aa11.22□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Sprr3O09116 238 aa11.22□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 P01738 130 aa11.22□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Rpl18aP62717 176 aaKnown RBP11.21□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Cystm1Q8K353 104 aa11.21□□□□□ -0.61
Smarcc1-204ENSMUST00000197984 Trav9d-3A0A075B695 113 aa11.21□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Trav4-3A0A0B4J1K1 110 aa11.21□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Setd2E9Q5F9 2537 aa11.21□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Igkv2-109A0A075B5K6 120 aa11.21□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 PlaurP35456 327 aa11.21□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Klk11Q9QYN3 276 aa11.21□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Cox6b1P56391 86 aaKnown RBP11.2□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Crlf1Q9JM58 425 aa11.2□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Igkv1-117A0A140T8M0 119 aa11.2□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Gm16381A0A1Y7VKT9 73 aa11.2□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 4930470P17RikQ9D542 155 aa11.19□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 CrygdP04342 174 aa11.19□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Trav13d-4A0A0G2JFX3 110 aa11.19□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Kmt2bO08550 2713 aa11.19□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Tep1P97499 2629 aa11.18□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 P01745 121 aa11.18□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 P01755 137 aa11.18□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 MifP34884 115 aaKnown RBP11.18□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Cops9Q3U898 57 aa11.18□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Tomm7Q9D173 55 aa11.18□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Ighv1-49A0A0A6YWX2 117 aa11.17□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Defa27F2Z403 93 aa11.17□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Q8R092 253 aa11.17□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 P06329 120 aa11.17□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Myo18bE9PV66 2605 aa11.16□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Gm10322F7D7I4 111 aa11.16□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Gm10509O88255 85 aa11.16□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Serp2Q6TAW2 65 aa11.16□□□□□ -0.62
Smarcc1-204ENSMUST00000197984 Fam19a5Q91WE9 132 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms