RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Ube2d3P61079 147 aa10.58□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Ube2d2P62838 147 aa10.58□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 9230102O04RikA2ASX7 82 aa10.58□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 SrarpQ3ULG3 163 aa10.57□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 BaalcQ8VHV1 145 aa10.57□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 1520401A03RikA0A0J9YVH6 598 aa10.57□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 HelzQ6DFV5 1964 aaKnown RBP10.57□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Trav14-1A0A0G2JF94 121 aa10.57□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Ighv1-72P01751 139 aa10.56□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Chchd7Q8K2Q5 85 aa10.56□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Esm1Q9QYY7 184 aa10.56□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Igkv3-4A0A140T8Q4 119 aa10.55□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Gm21748Q3UE70 102 aa10.55□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 1700011M02RikB1AX35 88 aa10.55□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 H2al1aQ5M8Q2 105 aa10.55□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 H2al1eQ810S6 105 aa10.55□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Gm6899Q3USS0 134 aa10.55□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Smr3aQ61900 147 aa10.54□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 P01755 137 aa10.54□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Pip4p1Q3TWL2 284 aa10.54□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Serp1Q9Z1W5 66 aa10.54□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Notch4P31695 1964 aa10.53□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Igkv1-117A0A140T8M0 119 aa10.53□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 LhbO09108 141 aa10.53□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Defb13Q8R2I4 64 aa10.53□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 AgrnA2ASQ1 1950 aa10.52□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 Igkv3-3A0A140T8Q0 119 aa10.52□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Igkv1-110A0A0B4J1I0 119 aa10.51□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Gm10490F6VBM2 120 aa10.51□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 1700056E22RikF7CNM6 234 aa10.51□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Sdk1Q3UH53 2193 aa10.51□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Tcl1b5P56845 121 aa10.5□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 4930564D02RikQ9D4S4 103 aa10.5□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Fhl2O70433 279 aa10.5□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Tet2Q4JK59 1912 aaKnown RBP10.5□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Ighv1-59A0A0A6YXE0 117 aa10.5□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Gm10509O88255 85 aa10.49□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Gm10647E9Q8X0 124 aa10.49□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Rpl28P41105 137 aaKnown RBP10.49□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 4930524J08RikQ9CUJ5 163 aa10.49□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Cdc42se2Q8BGH7 84 aa10.48□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Fer1l4A3KGK3 1992 aa10.48□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Cyyr1Q8VIH7 165 aa10.48□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 A0A286YE49 62 aa10.47□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Ccdc179J3QM76 67 aa10.47□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Ighv10-3A0A075B5T6 119 aa10.47□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Obox2E9PXV9 151 aa10.47□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Ly6c2P0CW03 131 aa10.47□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Pcnx3Q8VI59 2028 aa10.46□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 ScxQ64124 207 aa10.46□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Ovol3D3YYM0 189 aa10.46□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Wisp2Q9Z0G4 251 aa10.46□□□□□ -0.73
Pcdha8-201ENSMUST00000194038 Igkv8-21A0A140T8P7 120 aa10.46□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 PlaurP35456 327 aa10.46□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Q8K1L6 76 aa10.46□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Wdr90Q6ZPG2 1874 aa10.45□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Med13lQ6JPI3 2207 aa10.45□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 PrlhG3UWC3 86 aa10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Gm11011D3Z3L9 86 aa10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Psmb11Q8BG41 302 aa10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 SonQ9QX47 2444 aaKnown RBP10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Spink13Q3UTS8 97 aa10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Wfdc10Q3V2J9 124 aa10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Fam19a5Q91WE9 132 aa10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Pcnx2Q5DU28 2122 aa10.44□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Defb40Q70KL2 73 aa10.43□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Adamts20P59511 1906 aa10.43□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Krtap27-1E9PX37 202 aa10.43□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 4930556J24RikQ9D4U7 146 aa10.43□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 DysfQ9ESD7 2090 aa10.43□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 CdsnQ7TPC1 561 aa10.43□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Wfdc12Q9JHY3 85 aa10.43□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Trbv13-2A0A140T8N6 113 aa10.42□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 UqcrqQ9CQ69 82 aa10.42□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Tanc2A2A690 1994 aa10.42□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Ighv2-9-1A0A075B697 116 aa10.42□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Sprr2jO70561 109 aa10.42□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Gm10135F6TEE5 83 aa10.41□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 H2al1kJ3QP08 105 aa10.41□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Dkk4Q8VEJ3 221 aa10.41□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 TeppQ6IMH0 216 aa10.41□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Prrc2aQ7TSC1 2158 aaKnown RBP10.41□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Ep300B2RWS6 2412 aa10.41□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Cdip1Q9DB75 208 aa10.4□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 E130114P18RikF6S0S7 154 aa10.4□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Gm5142Q8C5X9 133 aa10.4□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Gm10845Q3UNY9 185 aa10.4□□□□□ -0.74
Pcdha8-201ENSMUST00000194038 Gm9925F6T2U3 160 aa10.39□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 NrgnP60761 78 aa10.39□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Crip3Q6Q6R3 243 aa10.39□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Defb42Q8BVB5 75 aa10.39□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Gm10549Q3URY4 149 aa10.39□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Cspg4Q8VHY0 2327 aa10.39□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Gm8439G3UWA7 96 aa10.38□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Nav2E9Q842 2432 aa10.38□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 P84750 121 aa10.38□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 A0A286YCN5 57 aa10.38□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 4930432M17RikQ3V0W9 174 aa10.38□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Q9DAB9 146 aa10.38□□□□□ -0.75
Pcdha8-201ENSMUST00000194038 Wnk1P83741 2377 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 102.4 ms