RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Cfap126Q6P8X9 189 aa5.61□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Fam19a4Q7TPG5 135 aa5.61□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Xirp2Q4U4S6 3784 aa5.61□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Tex15F8VPN2 2785 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 NpwA0A1L1STR8 176 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Hbb-b2P02089 147 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Defa7P50705 93 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Fhl1P97447 280 aaKnown RBP5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Igkv4-74A0A0B4J1I3 119 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Igkv4-71A0A0G2JEH0 117 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Polr2kQ63871 58 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Ighv1-50A0A075B5W1 117 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Smim10l1A0A087WNQ7 89 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Gm10337F7DEP7 55 aa5.6□□□□□ -1.51
Bdnf-203ENSMUST00000111043 2310009B15RikA0A0A6YWI4 143 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 E130218I03RikA0A0U1RNU5 63 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Gm11565A2A4M7 156 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 FcorP0DJI6 106 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 3110018I06RikQ9CXS0 120 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Tenm4Q3UHK6 2771 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Igkv4-59A0A0B4J1I8 117 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Gm10553J3QPF1 123 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 P06328 117 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Spata25Q9DA57 226 aa5.59□□□□□ -1.51
Bdnf-203ENSMUST00000111043 Gm20730A0A075B5J6 119 aa5.59□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gm10135F6TEE5 83 aa5.59□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gm20726G3UX18 150 aa5.59□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Prr9Q8BV84 116 aa5.59□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Itpr2Q9Z329 2701 aa5.59□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Usmg5Q78IK2 58 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Notch3Q61982 2318 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv1-5A0A0A6YWG2 117 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Sprr3O09116 238 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Rnf183Q8QZS5 190 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ndufb4Q9CQC7 129 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Timm17bQ9Z0V7 172 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv1-66A0A075B5X5 117 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 A030014E15RikA0A1Y7VJV2 120 aa5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Crip2Q9DCT8 208 aaKnown RBP5.58□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv3-3A0A0A6YWL2 116 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 1700056E22RikF7CNM6 234 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Psmb11Q8BG41 302 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Arhgap32Q811P8 2089 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Fbn1Q61554 2873 aaKnown RBP5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv1-85A0A075B5Y6 117 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Trav11A0A0B4J1J9 114 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gm16381A0A1Y7VKT9 73 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Hoxd3P09027 433 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gata1P17679 413 aa5.57□□□□□ -1.52
Bdnf-203ENSMUST00000111043 P01747 120 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Igf1P05017 153 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gm10197F6QEY5 67 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 SmcpP15265 143 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 BC025920Q3US60 128 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ss18Q62280 418 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Lage3Q9CR70 148 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 1700010B08RikQ9DAI7 102 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gm29666A0A087WQ99 126 aa5.56□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv2-6-8A0A0A6YWY9 116 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ank2Q8C8R3 3898 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Nbeal2Q6ZQA0 2742 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Trav14d-3-dv8A0A075B619 120 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv1-12A0A0A6YXJ9 117 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 AngP21570 145 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Cox17P56394 63 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 C1qcQ02105 246 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Defa21Q8C1P2 93 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Lst1O08843 95 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Hist1h4aP62806 103 aaKnown RBP5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gm21748Q3UE70 102 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Q9DAB9 146 aa5.55□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Zfp951A0A087WRH0 451 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 OdaphJ3QNT8 126 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Socs3O35718 225 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 SelenowP63300 88 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 CrygeQ03740 174 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Igkv4-70A0A0B4J1I5 116 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Acyp1P56376 99 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 CenpwQ3URR0 86 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Tmem243B2RVB9 118 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Pglyrp1O88593 182 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Apoc4Q61268 124 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gphb5Q812B2 130 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Spag11Q8K4N2 71 aa5.54□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv1-11A0A0A6YWI9 117 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ighv1-61P01749 117 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 P01753 117 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Defa20Q45VN2 95 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 GhrhP16043 103 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Ang3P97802 145 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Zc2hc1bQ9D534 172 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Igkv6-13A0A0G2JGY3 119 aa5.53□□□□□ -1.52
Bdnf-203ENSMUST00000111043 Gm10226O88253 85 aa5.52□□□□□ -1.53
Bdnf-203ENSMUST00000111043 Cox7a1P56392 80 aa5.52□□□□□ -1.53
Bdnf-203ENSMUST00000111043 SbsponQ3UPR9 264 aa5.52□□□□□ -1.53
Bdnf-203ENSMUST00000111043 Odf1Q61999 247 aa5.52□□□□□ -1.53
Bdnf-203ENSMUST00000111043 Trav13d-1A0A075B606 110 aa5.52□□□□□ -1.53
Bdnf-203ENSMUST00000111043 P84751 237 aa5.52□□□□□ -1.53
Bdnf-203ENSMUST00000111043 Fxyd5P97808 178 aa5.52□□□□□ -1.53
Bdnf-203ENSMUST00000111043 Dmbt1Q60997 2085 aa5.52□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms