RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Trav13d-1A0A075B606 110 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ighv8-12A0A0G2JDE1 119 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Gm10322F7D7I4 111 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Pip4p1Q3TWL2 284 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Triap1Q9D8Z2 76 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Gm10542F6XDR3 90 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Rnf185Q91YT2 192 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ypel4Q65Z93 127 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Trav13-1A0A075B644 110 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 SonQ9QX47 2444 aaKnown RBP5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 CtrlQ9ER05 264 aa5.2□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Gm12689Q8BQU9 117 aa5.19□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ighv8-5A0A0A6YY60 119 aa5.19□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Crip1P63254 77 aa5.19□□□□□ -1.58
Scn3a-202ENSMUST00000100069 P84751 237 aa5.19□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ube2d1P61080 147 aaKnown RBP5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Arhgap32Q811P8 2089 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ighv1-59A0A0A6YXE0 117 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 B230359F08RikA0A0B4J1K3 109 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 EnhoQ8K1D8 76 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Cd164Q9R0L9 197 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Gm12057A0A087WR21 115 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ube2d2P62838 147 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 PpdpfQ9CR37 115 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 P01823 113 aa5.18□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ighv3-3A0A0A6YWL2 116 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Shisa2Q8QZV2 295 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Klk5Q9D140 293 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ighv2-9-1A0A075B697 116 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Rpl28P41105 137 aaKnown RBP5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Col8a2P25318 699 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ighv1-66A0A075B5X5 117 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 A0A286YE49 62 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 C1qcQ02105 246 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 P01658 132 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 P01659 112 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 A130051J06RikQ8CAU1 227 aa5.17□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Sorl1O88307 2215 aaKnown RBP5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Igkv3-12A0A140T8P0 119 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Igkv1-117A0A140T8M0 119 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Gm44965A0A0N4SVR3 59 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Q9D8Q6 235 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Spg11Q3UHA3 2430 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 P01747 120 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Gm9949Q8C9F4 104 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Q9D131 166 aa5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Rps28P62858 69 aaKnown RBP5.16□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Ighv10-3A0A075B5T6 119 aa5.15□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Igkv8-28A0A0G2JE47 121 aa5.15□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Wipf1Q8K1I7 493 aa5.15□□□□□ -1.58
Scn3a-202ENSMUST00000100069 CnfnQ6PCW6 111 aa5.15□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Pla2g1bQ9Z0Y2 146 aa5.15□□□□□ -1.58
Scn3a-202ENSMUST00000100069 MsmpB1AWI6 139 aa5.15□□□□□ -1.58
Scn3a-202ENSMUST00000100069 Gm11011D3Z3L9 86 aa5.15□□□□□ -1.59
Scn3a-202ENSMUST00000100069 SycnQ8VCK7 134 aa5.15□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Gm10226O88253 85 aa5.15□□□□□ -1.59
Scn3a-202ENSMUST00000100069 LhbO09108 141 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Gm6899Q3USS0 134 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Gm17359A0A0G2JEB7 487 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 PtprbB2RU80 1998 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Sh2d1aO88890 126 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Gm20708H3BKF4 155 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Ighv2-3A0A075B696 115 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Sprr2jO70561 109 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 PscaP57096 123 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Lmo4P61969 165 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 4930556J24RikQ9D4U7 146 aa5.14□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Ly6c2P0CW03 131 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 FcorP0DJI6 106 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 2310009B15RikA0A0A6YWI4 143 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 AvpP35455 168 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 C2cd3Q52KB6 2323 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Ube2d3P61079 147 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Ly6hQ9WUC3 139 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Igkv1-110A0A0B4J1I0 119 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Brwd1Q921C3 2304 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Smrp1Q2MH31 260 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Q9DAQ5 155 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Nupr2Q497P3 102 aa5.13□□□□□ -1.59
Scn3a-202ENSMUST00000100069 4930564D02RikQ9D4S4 103 aa5.12□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Wdr38Q9D994 303 aa5.12□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Alms1Q8K4E0 3251 aa5.12□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Esm1Q9QYY7 184 aa5.11□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Znf239P24399 201 aa5.11□□□□□ -1.59
Scn3a-202ENSMUST00000100069 NrgnP60761 78 aa5.11□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Col5a1O88207 1838 aa5.11□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Smim1P0C8K7 78 aa5.1□□□□□ -1.59
Scn3a-202ENSMUST00000100069 E130116L18RikQ8BMV6 101 aa5.1□□□□□ -1.59
Scn3a-202ENSMUST00000100069 P06329 120 aa5.1□□□□□ -1.59
Scn3a-202ENSMUST00000100069 1520401A03RikA0A0J9YVH6 598 aa5.1□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Lrp4Q8VI56 1905 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Igkv3-7A0A0G2JE31 119 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 UqcrqQ9CQ69 82 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 BC107364E9Q5A2 140 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Lrrk2Q5S006 2527 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 1700056E22RikF7CNM6 234 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Fhl2O70433 279 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Gm10509O88255 85 aa5.09□□□□□ -1.59
Scn3a-202ENSMUST00000100069 Piezo1E2JF22 2547 aa5.09□□□□□ -1.6
Scn3a-202ENSMUST00000100069 Gm9887F6RFI0 207 aa5.09□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 114.8 ms