RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 Cops9Q3U898 57 aa12.59□□□□□ -0.39
Col4a3bp-201ENSMUST00000077672 Gcn1E9PVA8 2671 aaKnown RBP12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Trbv30A0A0B4J1P1 111 aa12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Xcl1P47993 114 aa12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 D130052B06RikQ3UW13 202 aa12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Trav9n-2A0A0G2JDP3 113 aa12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Klk1b4P00757 256 aa12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 5730596B20RikQ8BQ08 205 aa12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Mrpl52Q9D0Y8 121 aa12.58□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Defa4P28311 92 aa12.57□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Srsf12Q8C8K3 266 aa12.57□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 P01786 117 aa12.57□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Gm815Q3UWS2 115 aa12.57□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Fam110dQ80X91 271 aa12.57□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Ucn2Q99ML8 113 aa12.56□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 OtogO55225 2910 aa12.56□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Chd8Q09XV5 2582 aaKnown RBP12.56□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Utp20Q5XG71 2788 aaKnown RBP12.56□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 LystP97412 3788 aa12.55□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 7530416G11RikJ3QJX6 159 aa12.54□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Nav3Q80TN7 2359 aa12.54□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Gm20726G3UX18 150 aa12.54□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Gm9513B3GLJ6 99 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 P01738 130 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Ang3P97802 145 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Defb18Q30KP5 85 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 PemtQ61907 199 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 CdsnQ7TPC1 561 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Sostdc1Q9CQN4 206 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Usp9xP70398 2559 aaKnown RBP12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 SelenowP63300 88 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Dmbt1Q60997 2085 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Celsr2Q9R0M0 2920 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 4930546C10RikE9Q4Y3 121 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 P01823 113 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Gm10577Q3UDV9 132 aa12.53□□□□□ -0.4
Col4a3bp-201ENSMUST00000077672 Lst1O08843 95 aa12.52□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Fxyd5P97808 178 aa12.52□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Rnf152Q8BG47 203 aa12.52□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Notch3Q61982 2318 aa12.52□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Gm10542F6XDR3 90 aa12.51□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Gm3443F7CCV5 94 aa12.51□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 4930518I15RikQ3V2W7 57 aa12.51□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Ptpn13Q64512 2453 aa12.51□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Acyp1P56376 99 aa12.5□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Rpl18aP62717 176 aaKnown RBP12.5□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 4930519P11RikQ9CUJ8 166 aa12.5□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Nbeal1E9PYP2 2688 aa12.49□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Dand5Q76LW6 185 aa12.49□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Gm10549Q3URY4 149 aa12.48□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Gm9913Q8BQQ2 135 aa12.48□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Shisa2Q8QZV2 295 aa12.48□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Lage3Q9CR70 148 aa12.48□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Trav13n-1A0A0G2JEU8 110 aa12.47□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Tmem258P61166 79 aa12.47□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Q99M08 65 aa12.47□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 FlncQ8VHX6 2726 aaKnown RBP12.47□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Igkv4-79A0A075B5L8 119 aa12.47□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Gm8439G3UWA7 96 aa12.47□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 BC067074F6RXI4 2391 aa12.47□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Samd13D3YUG0 102 aa12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Ntn5Q3UQ22 452 aa12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Abca12E9Q876 2595 aa12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Ighv1-62-1A0A075B5U3 116 aa12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Ighv8-11A0A075B5X4 119 aa12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Rpl28P41105 137 aaKnown RBP12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 4930524J08RikQ9CUJ5 163 aa12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Dnal4Q9DCM4 105 aa12.46□□□□□ -0.41
Col4a3bp-201ENSMUST00000077672 Cox6b1P56391 86 aaKnown RBP12.46□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Gm19935A0A1B0GSF9 52 aa12.45□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Tmem86bQ497J1 226 aa12.45□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Serp2Q6TAW2 65 aa12.45□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Sh2d1aO88890 126 aa12.45□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 1700011M02RikB1AX35 88 aa12.43□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Gm7849D3YX03 116 aa12.43□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Vmo1Q5SXG7 201 aa12.43□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 P01729 129 aa12.43□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Chd9Q8BYH8 2885 aa12.42□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Tfpi2O35536 230 aa12.42□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Gm10300Q8C8P7 189 aa12.41□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Rpl36aP83882 106 aaKnown RBP12.41□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Spink1P09036 80 aa12.4□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Plac8l1Q08EJ0 177 aa12.4□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 Cdc42se2Q8BGH7 84 aa12.4□□□□□ -0.42
Col4a3bp-201ENSMUST00000077672 P01745 121 aa12.39□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Rnase1P00683 149 aa12.39□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 MifP34884 115 aaKnown RBP12.39□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Defa7P50705 93 aa12.39□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Tm2d2Q8R0I4 213 aa12.39□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Lypd5Q9D7Z7 256 aa12.39□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Defa21Q8C1P2 93 aa12.39□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 PrlhG3UWC3 86 aa12.38□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Hbb-b2P02089 147 aa12.38□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Defb42Q8BVB5 75 aa12.38□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Zfyve26Q5DU37 2529 aa12.37□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 9430069I07RikQ9CX21 111 aa12.37□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Gm16381A0A1Y7VKT9 73 aa12.37□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 9430015G10RikA2ASP7 199 aa12.37□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 Gm7075D3Z497 112 aa12.37□□□□□ -0.43
Col4a3bp-201ENSMUST00000077672 H2al1aQ5M8Q2 105 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms