RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Rp1l1Q8CGM2 1859 aa11.27□□□□□ -0.6
Atg4d-201ENSMUST00000065005 TshbP12656 138 aa11.27□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Wfdc12Q9JHY3 85 aa11.27□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Rbx1P62878 108 aa11.27□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Ighv1-72P01751 139 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Znf706Q9D115 76 aaKnown RBP11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Ighv1-61P01749 117 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Defb2P82020 71 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Gm8439G3UWA7 96 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Ube2d3P61079 147 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Shisa2Q8QZV2 295 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 CrygfQ9CXV3 174 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 HelzQ6DFV5 1964 aaKnown RBP11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 P01755 137 aa11.26□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Znf239P24399 201 aa11.25□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Psmb8P28063 276 aa11.25□□□□□ -0.61
Atg4d-201ENSMUST00000065005 P84750 121 aa11.25□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Dennd4cA6H8H2 1906 aa11.25□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Nup210Q9QY81 1886 aaKnown RBP11.25□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Wfdc13Q5DQQ6 81 aa11.25□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Rnf185Q91YT2 192 aa11.25□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Igkv3-7A0A0G2JE31 119 aa11.24□□□□□ -0.61
Atg4d-201ENSMUST00000065005 BaalcQ8VHV1 145 aa11.24□□□□□ -0.61
Atg4d-201ENSMUST00000065005 P01659 112 aa11.24□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Wipf1Q8K1I7 493 aa11.23□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Wfdc3Q14AE4 130 aa11.23□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Gm9767G3X930 207 aa11.23□□□□□ -0.61
Atg4d-201ENSMUST00000065005 P01823 113 aa11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Prr12E9PYL2 2035 aaKnown RBP11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Ighv8-5A0A0A6YY60 119 aa11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Ndufb1P0DN34 57 aa11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Gm11011D3Z3L9 86 aa11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Chchd7Q8K2Q5 85 aa11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Ep300B2RWS6 2412 aa11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Gm20604F8WIA3 75 aa11.22□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Apoc4Q61268 124 aa11.21□□□□□ -0.61
Atg4d-201ENSMUST00000065005 H2al1mQ9DAD9 105 aa11.21□□□□□ -0.61
Atg4d-201ENSMUST00000065005 Gpha2Q925Q5 128 aa11.21□□□□□ -0.62
Atg4d-201ENSMUST00000065005 SonQ9QX47 2444 aaKnown RBP11.21□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Atox1O08997 68 aaKnown RBP11.21□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Znf575Q3TXZ1 239 aa11.2□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Ighv1-66A0A075B5X5 117 aa11.2□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Igkv8-28A0A0G2JE47 121 aa11.2□□□□□ -0.62
Atg4d-201ENSMUST00000065005 PpdpfQ9CR37 115 aa11.2□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Ly6g6cQ9Z1Q4 126 aa11.2□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Fer1l4A3KGK3 1992 aa11.19□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Ighv2-6-8A0A0A6YWY9 116 aa11.19□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Defb10Q8R2I8 73 aa11.19□□□□□ -0.62
Atg4d-201ENSMUST00000065005 TectaO08523 2155 aa11.19□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Wfdc6bF6ULY1 148 aa11.19□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Rpl28P41105 137 aaKnown RBP11.19□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Dscaml1Q4VA61 2053 aa11.18□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Timm17bQ9Z0V7 172 aa11.18□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Gm10490F6VBM2 120 aa11.18□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Defb42Q8BVB5 75 aa11.17□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Ube2d2P62838 147 aa11.16□□□□□ -0.62
Atg4d-201ENSMUST00000065005 4930564D02RikQ9D4S4 103 aa11.16□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Gm16223Q8CBM3 117 aa11.16□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Ovol3D3YYM0 189 aa11.15□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Tmem213Q08EA8 116 aa11.15□□□□□ -0.62
Atg4d-201ENSMUST00000065005 Gm21748Q3UE70 102 aa11.14□□□□□ -0.63
Atg4d-201ENSMUST00000065005 1600014C23RikQ9DAX4 101 aa11.14□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Gvin1Q80SU7 2427 aa11.14□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Lypd6Q8BPP5 171 aa11.13□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Trbv13-2A0A140T8N6 113 aa11.13□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Gm9887F6RFI0 207 aa11.13□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Wdr38Q9D994 303 aa11.12□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Notch3Q61982 2318 aa11.12□□□□□ -0.63
Atg4d-201ENSMUST00000065005 D730001G18RikA0A087WQU7 115 aa11.12□□□□□ -0.63
Atg4d-201ENSMUST00000065005 A0A286YE49 62 aa11.12□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Adm2Q7TNK8 150 aa11.12□□□□□ -0.63
Atg4d-201ENSMUST00000065005 CrygeQ03740 174 aa11.12□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Gm9922Q8C3P1 144 aa11.11□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Ighv8-11A0A075B5X4 119 aa11.11□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Serp1Q9Z1W5 66 aa11.11□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Med13lQ6JPI3 2207 aa11.11□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Cspg4Q8VHY0 2327 aa11.1□□□□□ -0.63
Atg4d-201ENSMUST00000065005 NpwA0A1L1STR8 176 aa11.1□□□□□ -0.63
Atg4d-201ENSMUST00000065005 DscamQ9ERC8 2013 aa11.1□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Gm28374F6SG70 93 aa11.1□□□□□ -0.63
Atg4d-201ENSMUST00000065005 9230102O04RikA2ASX7 82 aa11.09□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Sox16Q62247 57 aa11.09□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Bri3P28662 125 aa11.09□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Gm1968Q3T9I3 115 aa11.09□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Prrc2aQ7TSC1 2158 aaKnown RBP11.09□□□□□ -0.63
Atg4d-201ENSMUST00000065005 1700011M02RikB1AX35 88 aa11.09□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Pou2af1Q64693 256 aa11.09□□□□□ -0.63
Atg4d-201ENSMUST00000065005 Vpreb1P13372 142 aa11.08□□□□□ -0.64
Atg4d-201ENSMUST00000065005 PtprsB0V2N1 1907 aa11.08□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Sdk1Q3UH53 2193 aa11.08□□□□□ -0.64
Atg4d-201ENSMUST00000065005 TeppQ6IMH0 216 aa11.07□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Cdc42se2Q8BGH7 84 aa11.07□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Gm10267M0QWD8 85 aa11.06□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Gm10509O88255 85 aa11.06□□□□□ -0.64
Atg4d-201ENSMUST00000065005 1700056E22RikF7CNM6 234 aa11.06□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Gm10322F7D7I4 111 aa11.06□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Plxnb3Q9QY40 1902 aa11.06□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Polr2kQ63871 58 aa11.05□□□□□ -0.64
Atg4d-201ENSMUST00000065005 DysfQ9ESD7 2090 aa11.05□□□□□ -0.64
Atg4d-201ENSMUST00000065005 Defb38Q7TNV7 63 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms