RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Prr15lQ8JZM2 100 aa10.9□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Smim1P0C8K7 78 aa10.9□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Cd27P41272 250 aa10.9□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Wfdc10Q3V2J9 124 aa10.9□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 AgrnA2ASQ1 1950 aa10.9□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 P01823 113 aa10.9□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Defb13Q8R2I4 64 aa10.9□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Ovol3D3YYM0 189 aa10.89□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 P06320 134 aa10.89□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Cox7bP56393 80 aa10.89□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Znf575Q3TXZ1 239 aa10.88□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Atox1O08997 68 aaKnown RBP10.88□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Edn2P22389 175 aa10.88□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Obox2E9PXV9 151 aa10.88□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Rnf152Q8BG47 203 aa10.88□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Wdr38Q9D994 303 aa10.87□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 EnhoQ8K1D8 76 aa10.87□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 PlaurP35456 327 aa10.87□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Wfdc15aQ8BH89 80 aa10.86□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 4930564D02RikQ9D4S4 103 aa10.86□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 2010109I03RikQ9CQ11 111 aa10.86□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 LhbO09108 141 aa10.86□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Ube2d1P61080 147 aaKnown RBP10.86□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Vpreb1P13372 142 aa10.86□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 PrlhG3UWC3 86 aa10.85□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Spg11Q3UHA3 2430 aa10.85□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Serp2Q6TAW2 65 aa10.85□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Ighv2-9-1A0A075B697 116 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Psmb11Q8BG41 302 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 BaalcQ8VHV1 145 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Gm10490F6VBM2 120 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Gm10509O88255 85 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Gm9922Q8C3P1 144 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Esm1Q9QYY7 184 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Dopey1Q8BL99 2399 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 5730596B20RikQ8BQ08 205 aa10.84□□□□□ -0.67
Pcdh20-201ENSMUST00000061628 Igkv4-92A0A0B4J1I2 117 aa10.83□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Znf706Q9D115 76 aaKnown RBP10.83□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Wisp2Q9Z0G4 251 aa10.83□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Ube2d3P61079 147 aa10.82□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Ube2d2P62838 147 aa10.82□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 SbsponQ3UPR9 264 aa10.82□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Defb42Q8BVB5 75 aa10.82□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Prrc2aQ7TSC1 2158 aaKnown RBP10.82□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Ndufb1P0DN34 57 aa10.81□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Gm16223Q8CBM3 117 aa10.8□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Fam19a5Q91WE9 132 aa10.8□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Cdc42se2Q8BGH7 84 aa10.8□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Ighv1-72P01751 139 aa10.79□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Krtap27-1E9PX37 202 aa10.79□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 PscaP57096 123 aa10.79□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 DscamQ9ERC8 2013 aa10.79□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 BtcQ05928 177 aa10.78□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 P01755 137 aa10.78□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 SycnQ8VCK7 134 aa10.78□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 CrygfQ9CXV3 174 aa10.78□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Dscaml1Q4VA61 2053 aa10.78□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Gm1968Q3T9I3 115 aa10.78□□□□□ -0.68
Pcdh20-201ENSMUST00000061628 Tet2Q4JK59 1912 aaKnown RBP10.77□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Igkv1-117A0A140T8M0 119 aa10.77□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 1700011M02RikB1AX35 88 aa10.77□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 P06329 120 aa10.77□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 4930556J24RikQ9D4U7 146 aa10.77□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 H2al1bA0A087WP11 105 aa10.76□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Gm11011D3Z3L9 86 aa10.76□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Igkv1-110A0A0B4J1I0 119 aa10.76□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 CenpwQ3URR0 86 aa10.75□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 SvipQ3UZP4 77 aa10.75□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Dido1Q8C9B9 2256 aaKnown RBP10.75□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Pcnx3Q8VI59 2028 aa10.75□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Q9DAB9 146 aa10.75□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Brwd1Q921C3 2304 aa10.75□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Ighv10-3A0A075B5T6 119 aa10.74□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Nupr2Q497P3 102 aa10.74□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Rpl28P41105 137 aaKnown RBP10.73□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Sdk1Q3UH53 2193 aa10.72□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 AcacbE9Q4Z2 2448 aa10.72□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Nav2E9Q842 2432 aa10.72□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 DysfQ9ESD7 2090 aa10.72□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Trav14-1A0A0G2JF94 121 aa10.72□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 A0A286YE49 62 aa10.71□□□□□ -0.69
Pcdh20-201ENSMUST00000061628 Sorl1O88307 2215 aaKnown RBP10.71□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Igkv8-30A0A140T8M3 121 aa10.71□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Gm9767G3X930 207 aa10.71□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Trbv13-2A0A140T8N6 113 aa10.7□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Sprr2jO70561 109 aa10.7□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Adamts20P59511 1906 aa10.7□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Ndufs5Q99LY9 106 aa10.7□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 AcanQ61282 2132 aaKnown RBP10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 A830031A19RikQ8BNT5 113 aa10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Shisa2Q8QZV2 295 aa10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 A930009A15RikG3UYI6 118 aa10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Smrp1Q2MH31 260 aa10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 H2al1aQ5M8Q2 105 aa10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 H2al1eQ810S6 105 aa10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Pcnx2Q5DU28 2122 aa10.69□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 SrarpQ3ULG3 163 aa10.68□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Smr3aQ61900 147 aa10.68□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Zfyve26Q5DU37 2529 aa10.68□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Pla2g1bQ9Z0Y2 146 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms