RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Ighv1-66A0A075B5X5 117 aa12.82□□□□□ -0.36
Usp48-201ENSMUST00000055131 Fhl2O70433 279 aa12.82□□□□□ -0.36
Usp48-201ENSMUST00000055131 A0A286YCN5 57 aa12.82□□□□□ -0.36
Usp48-201ENSMUST00000055131 A830005F24RikQ8BRT5 167 aa12.82□□□□□ -0.36
Usp48-201ENSMUST00000055131 Igkv8-21A0A140T8P7 120 aa12.82□□□□□ -0.36
Usp48-201ENSMUST00000055131 FshbQ60687 130 aa12.82□□□□□ -0.36
Usp48-201ENSMUST00000055131 P01823 113 aa12.81□□□□□ -0.36
Usp48-201ENSMUST00000055131 Lypd6Q8BPP5 171 aa12.81□□□□□ -0.36
Usp48-201ENSMUST00000055131 P06320 134 aa12.81□□□□□ -0.36
Usp48-201ENSMUST00000055131 P01755 137 aa12.81□□□□□ -0.36
Usp48-201ENSMUST00000055131 PlaurP35456 327 aa12.81□□□□□ -0.36
Usp48-201ENSMUST00000055131 Ighv2-6-8A0A0A6YWY9 116 aa12.8□□□□□ -0.36
Usp48-201ENSMUST00000055131 Ndufc1Q9CQY9 76 aa12.8□□□□□ -0.36
Usp48-201ENSMUST00000055131 BtcQ05928 177 aa12.8□□□□□ -0.36
Usp48-201ENSMUST00000055131 Pla2g2cP48076 150 aa12.8□□□□□ -0.36
Usp48-201ENSMUST00000055131 Ighv1-59A0A0A6YXE0 117 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Pcnx3Q8VI59 2028 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Sptbn4E9PX29 2561 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Ighv1-62-1A0A075B5U3 116 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Ighv10-1A0A0B4J1J6 119 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Psmb8P28063 276 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Golgb1E9PVZ8 3238 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Ighv3-3A0A0A6YWL2 116 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Tcl1b3P56842 122 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 Wfdc12Q9JHY3 85 aa12.79□□□□□ -0.36
Usp48-201ENSMUST00000055131 DysfQ9ESD7 2090 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Wdr38Q9D994 303 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Pkd1l2Q7TN88 2461 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Ighv10-3A0A075B5T6 119 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Cyyr1Q8VIH7 165 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Timm17bQ9Z0V7 172 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Gm3285A0A1W2P7U0 201 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Rbx1P62878 108 aa12.78□□□□□ -0.36
Usp48-201ENSMUST00000055131 Sec61gP60060 68 aa12.77□□□□□ -0.36
Usp48-201ENSMUST00000055131 LhbO09108 141 aa12.77□□□□□ -0.37
Usp48-201ENSMUST00000055131 Wfdc15aQ8BH89 80 aa12.77□□□□□ -0.37
Usp48-201ENSMUST00000055131 Gm10490F6VBM2 120 aa12.76□□□□□ -0.37
Usp48-201ENSMUST00000055131 Defb40Q70KL2 73 aa12.76□□□□□ -0.37
Usp48-201ENSMUST00000055131 Col4a4Q9QZR9 1682 aa12.75□□□□□ -0.37
Usp48-201ENSMUST00000055131 Znf575Q3TXZ1 239 aa12.75□□□□□ -0.37
Usp48-201ENSMUST00000055131 5730596B20RikQ8BQ08 205 aa12.74□□□□□ -0.37
Usp48-201ENSMUST00000055131 Obox2E9PXV9 151 aa12.74□□□□□ -0.37
Usp48-201ENSMUST00000055131 Gm12057A0A087WR21 115 aa12.74□□□□□ -0.37
Usp48-201ENSMUST00000055131 Gm28539A0A087WSL9 92 aa12.74□□□□□ -0.37
Usp48-201ENSMUST00000055131 Smim1P0C8K7 78 aa12.74□□□□□ -0.37
Usp48-201ENSMUST00000055131 Pcsk5Q04592 1877 aa12.73□□□□□ -0.37
Usp48-201ENSMUST00000055131 Ccdc179J3QM76 67 aa12.73□□□□□ -0.37
Usp48-201ENSMUST00000055131 Gm8439G3UWA7 96 aa12.73□□□□□ -0.37
Usp48-201ENSMUST00000055131 Brwd1Q921C3 2304 aa12.73□□□□□ -0.37
Usp48-201ENSMUST00000055131 Tanc2A2A690 1994 aa12.73□□□□□ -0.37
Usp48-201ENSMUST00000055131 Gm21748Q3UE70 102 aa12.73□□□□□ -0.37
Usp48-201ENSMUST00000055131 Ighv8-11A0A075B5X4 119 aa12.72□□□□□ -0.37
Usp48-201ENSMUST00000055131 Polr2kQ63871 58 aa12.71□□□□□ -0.37
Usp48-201ENSMUST00000055131 Tcl1b5P56845 121 aa12.71□□□□□ -0.38
Usp48-201ENSMUST00000055131 Ube2d1P61080 147 aaKnown RBP12.7□□□□□ -0.38
Usp48-201ENSMUST00000055131 Nupr2Q497P3 102 aa12.7□□□□□ -0.38
Usp48-201ENSMUST00000055131 Tet2Q4JK59 1912 aaKnown RBP12.7□□□□□ -0.38
Usp48-201ENSMUST00000055131 AgrnA2ASQ1 1950 aa12.7□□□□□ -0.38
Usp48-201ENSMUST00000055131 Chchd7Q8K2Q5 85 aa12.7□□□□□ -0.38
Usp48-201ENSMUST00000055131 Ndufs5Q99LY9 106 aa12.7□□□□□ -0.38
Usp48-201ENSMUST00000055131 Wfdc10Q3V2J9 124 aa12.69□□□□□ -0.38
Usp48-201ENSMUST00000055131 H2al1bA0A087WP11 105 aa12.69□□□□□ -0.38
Usp48-201ENSMUST00000055131 Cox8cA6H666 72 aa12.68□□□□□ -0.38
Usp48-201ENSMUST00000055131 1700011M02RikB1AX35 88 aa12.68□□□□□ -0.38
Usp48-201ENSMUST00000055131 Prrc2aQ7TSC1 2158 aaKnown RBP12.68□□□□□ -0.38
Usp48-201ENSMUST00000055131 Gm4707V9GXN5 68 aa12.68□□□□□ -0.38
Usp48-201ENSMUST00000055131 Gm6899Q3USS0 134 aa12.68□□□□□ -0.38
Usp48-201ENSMUST00000055131 BaalcQ8VHV1 145 aa12.67□□□□□ -0.38
Usp48-201ENSMUST00000055131 Defb42Q8BVB5 75 aa12.67□□□□□ -0.38
Usp48-201ENSMUST00000055131 Gpha2Q925Q5 128 aa12.67□□□□□ -0.38
Usp48-201ENSMUST00000055131 Vpreb1P13372 142 aa12.66□□□□□ -0.38
Usp48-201ENSMUST00000055131 1700056E22RikF7CNM6 234 aa12.66□□□□□ -0.38
Usp48-201ENSMUST00000055131 SycnQ8VCK7 134 aa12.66□□□□□ -0.38
Usp48-201ENSMUST00000055131 Pla2g2eQ9QUL3 142 aa12.66□□□□□ -0.38
Usp48-201ENSMUST00000055131 Lrrk2Q5S006 2527 aa12.66□□□□□ -0.38
Usp48-201ENSMUST00000055131 Piezo2Q8CD54 2822 aa12.66□□□□□ -0.38
Usp48-201ENSMUST00000055131 Sorl1O88307 2215 aaKnown RBP12.65□□□□□ -0.38
Usp48-201ENSMUST00000055131 Wfdc13Q5DQQ6 81 aa12.65□□□□□ -0.38
Usp48-201ENSMUST00000055131 CrygfQ9CXV3 174 aa12.65□□□□□ -0.38
Usp48-201ENSMUST00000055131 DscamQ9ERC8 2013 aa12.65□□□□□ -0.38
Usp48-201ENSMUST00000055131 Atox1O08997 68 aaKnown RBP12.65□□□□□ -0.39
Usp48-201ENSMUST00000055131 Igkv3-12A0A140T8P0 119 aa12.64□□□□□ -0.39
Usp48-201ENSMUST00000055131 Ovol3D3YYM0 189 aa12.64□□□□□ -0.39
Usp48-201ENSMUST00000055131 P06329 120 aa12.64□□□□□ -0.39
Usp48-201ENSMUST00000055131 Smrp1Q2MH31 260 aa12.64□□□□□ -0.39
Usp48-201ENSMUST00000055131 Gm10509O88255 85 aa12.63□□□□□ -0.39
Usp48-201ENSMUST00000055131 Gm10322F7D7I4 111 aa12.63□□□□□ -0.39
Usp48-201ENSMUST00000055131 4930564D02RikQ9D4S4 103 aa12.63□□□□□ -0.39
Usp48-201ENSMUST00000055131 Pcnx2Q5DU28 2122 aa12.63□□□□□ -0.39
Usp48-201ENSMUST00000055131 Ube2d3P61079 147 aa12.63□□□□□ -0.39
Usp48-201ENSMUST00000055131 Ube2d2P62838 147 aa12.63□□□□□ -0.39
Usp48-201ENSMUST00000055131 Gm9767G3X930 207 aa12.62□□□□□ -0.39
Usp48-201ENSMUST00000055131 Cdc42se2Q8BGH7 84 aa12.62□□□□□ -0.39
Usp48-201ENSMUST00000055131 Defb2P82020 71 aa12.62□□□□□ -0.39
Usp48-201ENSMUST00000055131 SrarpQ3ULG3 163 aa12.62□□□□□ -0.39
Usp48-201ENSMUST00000055131 Abca2P41234 2434 aa12.62□□□□□ -0.39
Usp48-201ENSMUST00000055131 CnfnQ6PCW6 111 aa12.61□□□□□ -0.39
Usp48-201ENSMUST00000055131 Gm9922Q8C3P1 144 aa12.61□□□□□ -0.39
Usp48-201ENSMUST00000055131 Gm10577Q3UDV9 132 aa12.61□□□□□ -0.39
Usp48-201ENSMUST00000055131 Serp2Q6TAW2 65 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms