RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Ighv1-63A0A075B5X2 117 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 B9d2Q3UK10 175 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Mrpl35Q9CQL6 188 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 PcntP48725 2898 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 CrygeQ03740 174 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Pkd1l2Q7TN88 2461 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ighv2-6A0A075B6A7 116 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Fhl2O70433 279 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Rpl39P62892 51 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 C1qcQ02105 246 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ndufa4l2Q4FZG9 87 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ormdl1Q921I0 153 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Klk5Q9D140 293 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ttc28Q80XJ3 2450 aa5.6□□□□□ -1.51
Usp40-201ENSMUST00000040783 Sorl1O88307 2215 aaKnown RBP5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ighv1-11A0A0A6YWI9 117 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Trav13d-4A0A0G2JFX3 110 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Atox1O08997 68 aaKnown RBP5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ntn5Q3UQ22 452 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Trav13n-1A0A0G2JEU8 110 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ovol3D3YYM0 189 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 TeppQ6IMH0 216 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Shisa2Q8QZV2 295 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Ighv1-85A0A075B5Y6 117 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 A130051J06RikQ8CAU1 227 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 CrygfQ9CXV3 174 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Hivep2Q3UHF7 2430 aa5.59□□□□□ -1.51
Usp40-201ENSMUST00000040783 Gm10518F6UQQ9 182 aa5.59□□□□□ -1.52
Usp40-201ENSMUST00000040783 Defb29Q8BGW9 78 aa5.59□□□□□ -1.52
Usp40-201ENSMUST00000040783 BC067074F6RXI4 2391 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Spint4Q9D263 159 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Ankhd1E9PUR0 2548 aaKnown RBP5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Igkv4-74A0A0B4J1I3 119 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 1700056E22RikF7CNM6 234 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Ndufb1P0DN34 57 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Eif4ebp1Q60876 117 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Dchs2A0A0A6YW72 3346 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Lst1O08843 95 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 P01747 120 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Eml6Q5SQM0 1958 aa5.58□□□□□ -1.52
Usp40-201ENSMUST00000040783 Sh2d1aO88890 126 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Pcnx2Q5DU28 2122 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Igkv1-122A0A140T8M9 119 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 EnhoQ8K1D8 76 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Zfhx3Q61329 3726 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Tanc2A2A690 1994 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Frem2Q6NVD0 3160 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Trav9n-4A0A075B631 113 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Gm17359A0A0G2JEB7 487 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 TrioQ0KL02 3102 aa5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 Mki67E9PVX6 3177 aaKnown RBP5.57□□□□□ -1.52
Usp40-201ENSMUST00000040783 PrlhG3UWC3 86 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 4930432M17RikQ3V0W9 174 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 Gm5468Q8C3D3 155 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 Brca2P97929 3329 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 Igkv8-18A0A0B4J1J3 123 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 1520401A03RikA0A0J9YVH6 598 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 Gm44965A0A0N4SVR3 59 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 SnurfQ9WU12 71 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 Myo9aQ8C170 2542 aa5.56□□□□□ -1.52
Usp40-201ENSMUST00000040783 PscaP57096 123 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Ighv1-59A0A0A6YXE0 117 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Igkv1-88A0A140T8N1 120 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Gm42674D3YUT9 64 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 P06329 120 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Znf239P24399 201 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Ranbp2Q9ERU9 3053 aaKnown RBP5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Piezo2Q8CD54 2822 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Trav13-2A0A075B649 110 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Trav13-4-dv7A0A075B6C2 110 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 Igkv3-5A0A140T8M6 119 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 UqcrqQ9CQ69 82 aa5.55□□□□□ -1.52
Usp40-201ENSMUST00000040783 SetxA2AKX3 2646 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Vps13aQ5H8C4 3166 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 TrrapQ80YV3 2565 aaKnown RBP5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Chchd7Q8K2Q5 85 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Igkv3-10A0A0G2JGN0 119 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Gm10542F6XDR3 90 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Gm17577J3QNF7 156 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Lrp4Q8VI56 1905 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Fgfbp3Q1HCM0 245 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Pla2g1bQ9Z0Y2 146 aa5.54□□□□□ -1.52
Usp40-201ENSMUST00000040783 Triap1Q9D8Z2 76 aa5.53□□□□□ -1.52
Usp40-201ENSMUST00000040783 Snai3Q9QY31 287 aa5.53□□□□□ -1.52
Usp40-201ENSMUST00000040783 Gm9573F7C950 1606 aa5.53□□□□□ -1.52
Usp40-201ENSMUST00000040783 Jbts17Q8CE72 3214 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm5153P01627 120 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Q9D131 166 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 HttP42859 3119 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Nav2E9Q842 2432 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm21748Q3UE70 102 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm12689Q8BQU9 117 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Gm9922Q8C3P1 144 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Trav13-1A0A075B644 110 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Ighv3-3A0A0A6YWL2 116 aa5.52□□□□□ -1.53
Usp40-201ENSMUST00000040783 Smim1P0C8K7 78 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 Rnf152Q8BG47 203 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 Ufsp1Q9CZP0 217 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 1700010B08RikQ9DAI7 102 aa5.51□□□□□ -1.53
Usp40-201ENSMUST00000040783 Flg2Q2VIS4 2362 aa5.51□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 170.4 ms