RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 E130116L18RikQ8BMV6 101 aa7.5□□□□□ -1.21
Ubr1-201ENSMUST00000028728 UqcrqQ9CQ69 82 aa7.5□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm9805F6YK59 57 aa7.5□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm3618D3Z4P5 127 aa7.5□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Chchd7Q8K2Q5 85 aa7.5□□□□□ -1.21
Ubr1-201ENSMUST00000028728 P06320 134 aa7.5□□□□□ -1.21
Ubr1-201ENSMUST00000028728 4930524J08RikQ9CUJ5 163 aa7.49□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Ovol3D3YYM0 189 aa7.49□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Prh1P05142 261 aa7.49□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm21748Q3UE70 102 aa7.49□□□□□ -1.21
Ubr1-201ENSMUST00000028728 1700011M02RikB1AX35 88 aa7.49□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm10226O88253 85 aa7.49□□□□□ -1.21
Ubr1-201ENSMUST00000028728 LhbO09108 141 aa7.48□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Fgf23Q9EPC2 251 aa7.48□□□□□ -1.21
Ubr1-201ENSMUST00000028728 NpwA0A1L1STR8 176 aa7.48□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Rnase1P00683 149 aa7.48□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm17521F6QAC8 156 aa7.48□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Rps28P62858 69 aaKnown RBP7.48□□□□□ -1.21
Ubr1-201ENSMUST00000028728 A830005F24RikQ8BRT5 167 aa7.48□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Cyyr1Q8VIH7 165 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Trav14-1A0A0G2JF94 121 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm10735Q3US96 136 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Q9DAB9 146 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm10549Q3URY4 149 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 H2al1bA0A087WP11 105 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm10509O88255 85 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Fam110dQ80X91 271 aa7.47□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Krtap27-1E9PX37 202 aa7.46□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Gm10135F6TEE5 83 aa7.46□□□□□ -1.21
Ubr1-201ENSMUST00000028728 9530003J23RikQ8BM26 151 aa7.46□□□□□ -1.21
Ubr1-201ENSMUST00000028728 Csdc2Q91YQ3 154 aa7.46□□□□□ -1.21
Ubr1-201ENSMUST00000028728 AcanQ61282 2132 aaKnown RBP7.46□□□□□ -1.22
Ubr1-201ENSMUST00000028728 BaalcQ8VHV1 145 aa7.45□□□□□ -1.22
Ubr1-201ENSMUST00000028728 4930564D02RikQ9D4S4 103 aa7.45□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Wdr90Q6ZPG2 1874 aa7.45□□□□□ -1.22
Ubr1-201ENSMUST00000028728 4930432M17RikQ3V0W9 174 aa7.45□□□□□ -1.22
Ubr1-201ENSMUST00000028728 BC025920Q3US60 128 aa7.45□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Sorl1O88307 2215 aaKnown RBP7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Ighv1-72P01751 139 aa7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Cdc42se2Q8BGH7 84 aa7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Zc2hc1bQ9D534 172 aa7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Gm10490F6VBM2 120 aa7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 P01729 129 aa7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Gm10845Q3UNY9 185 aa7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Defb18Q30KP5 85 aa7.44□□□□□ -1.22
Ubr1-201ENSMUST00000028728 TeppQ6IMH0 216 aa7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 4930535I16RikQ9CUI2 172 aa7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Igkv3-5A0A140T8M6 119 aa7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Ntn5Q3UQ22 452 aa7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Reg3bP35230 175 aa7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Cox7bP56393 80 aa7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Ndufs5Q99LY9 106 aa7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Dido1Q8C9B9 2256 aaKnown RBP7.43□□□□□ -1.22
Ubr1-201ENSMUST00000028728 9230102O04RikA2ASX7 82 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Plac8l1Q08EJ0 177 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Dopey1Q8BL99 2399 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Brwd1Q921C3 2304 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Rtl10D3YWW5 146 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Gm10647E9Q8X0 124 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Fhl2O70433 279 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 4930556J24RikQ9D4U7 146 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Ube2aQ9Z255 152 aa7.42□□□□□ -1.22
Ubr1-201ENSMUST00000028728 P01755 137 aa7.41□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Arhgap32Q811P8 2089 aa7.41□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Ighv2-9-1A0A075B697 116 aa7.41□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Apoc4Q61268 124 aa7.41□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Defb45Q3V490 66 aa7.4□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Sprr2jO70561 109 aa7.4□□□□□ -1.22
Ubr1-201ENSMUST00000028728 H2al1aQ5M8Q2 105 aa7.4□□□□□ -1.22
Ubr1-201ENSMUST00000028728 H2al1eQ810S6 105 aa7.4□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Crip2Q9DCT8 208 aaKnown RBP7.4□□□□□ -1.22
Ubr1-201ENSMUST00000028728 Tns1E9Q0S6 1888 aaKnown RBP7.4□□□□□ -1.22
Ubr1-201ENSMUST00000028728 SbsponQ3UPR9 264 aa7.4□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Sec61gP60060 68 aa7.39□□□□□ -1.23
Ubr1-201ENSMUST00000028728 2010109I03RikQ9CQ11 111 aa7.39□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Gm5142Q8C5X9 133 aa7.39□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Higd2aQ9CQJ1 106 aa7.39□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Ighv10-3A0A075B5T6 119 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Ighv1-59A0A0A6YXE0 117 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Gm11011D3Z3L9 86 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 H2al1kJ3QP08 105 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 A0A286YE49 62 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 CdsnQ7TPC1 561 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Pla2g2aP31482 146 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Shisa2Q8QZV2 295 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Psmb11Q8BG41 302 aa7.38□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Trbv13-2A0A140T8N6 113 aa7.37□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Igkv4-92A0A0B4J1I2 117 aa7.37□□□□□ -1.23
Ubr1-201ENSMUST00000028728 2310009B15RikA0A0A6YWI4 143 aa7.36□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Ighv1-56A0A0A6YXG2 117 aa7.36□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Pip4p1Q3TWL2 284 aa7.36□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Q8K1L6 76 aa7.36□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Fam19a1Q7TPG8 133 aa7.35□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Gm26566Q8CAC1 153 aa7.35□□□□□ -1.23
Ubr1-201ENSMUST00000028728 3110070M22RikQ9DAQ7 118 aa7.35□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Alms1Q8K4E0 3251 aa7.35□□□□□ -1.23
Ubr1-201ENSMUST00000028728 1700012A03RikQ9DAF1 130 aa7.34□□□□□ -1.23
Ubr1-201ENSMUST00000028728 PtprbB2RU80 1998 aa7.34□□□□□ -1.23
Ubr1-201ENSMUST00000028728 B230217C12RikE9Q3Z1 139 aa7.34□□□□□ -1.23
Ubr1-201ENSMUST00000028728 Gm9922Q8C3P1 144 aa7.34□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms