RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm10542F6XDR3 90 aa11.95□□□□□ -0.5
Ctcf-201ENSMUST00000005841 SelenowP63300 88 aa11.95□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Znf740Q6NZQ6 180 aa11.95□□□□□ -0.5
Ctcf-201ENSMUST00000005841 CrygaP04345 174 aa11.95□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Fam110dQ80X91 271 aa11.95□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Cdc42se2Q8BGH7 84 aa11.95□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Ighv1-56A0A0A6YXG2 117 aa11.95□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Acyp1P56376 99 aa11.94□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Gm21994F6T2D2 329 aa11.94□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Defa25Q5G864 92 aa11.94□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Defa1P11477 93 aa11.94□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Gm11020F6ZGD5 61 aa11.93□□□□□ -0.5
Ctcf-201ENSMUST00000005841 MalO09198 153 aa11.92□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Defa16P50714 93 aa11.92□□□□□ -0.5
Ctcf-201ENSMUST00000005841 CirbpP60824 172 aaKnown RBP11.92□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Med13lQ6JPI3 2207 aa11.91□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Ifitm6A0A1B0GS75 124 aa11.91□□□□□ -0.5
Ctcf-201ENSMUST00000005841 GfyJ3KML8 504 aa11.91□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Xcl1P47993 114 aa11.91□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Rpl18aP62717 176 aaKnown RBP11.91□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Lage3Q9CR70 148 aa11.91□□□□□ -0.5
Ctcf-201ENSMUST00000005841 Dand5Q76LW6 185 aa11.9□□□□□ -0.5
Ctcf-201ENSMUST00000005841 9430069I07RikQ9CX21 111 aa11.9□□□□□ -0.5
Ctcf-201ENSMUST00000005841 P01745 121 aa11.9□□□□□ -0.51
Ctcf-201ENSMUST00000005841 E130208F15RikQ3UPV3 143 aa11.9□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Defa2P28309 93 aa11.89□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Sh2d1aO88890 126 aa11.89□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Cops9Q3U898 57 aa11.89□□□□□ -0.51
Ctcf-201ENSMUST00000005841 4930470P17RikQ9D542 155 aa11.88□□□□□ -0.51
Ctcf-201ENSMUST00000005841 P04219 140 aa11.88□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Krtap16-1A2A5X5 502 aa11.88□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Sptan1P16546 2472 aaKnown RBP11.87□□□□□ -0.51
Ctcf-201ENSMUST00000005841 P01729 129 aa11.87□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Defb33Q30KN3 62 aa11.87□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Gm10647E9Q8X0 124 aa11.87□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Gm10772F7AIG4 85 aa11.87□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Il19Q8CJ70 176 aa11.86□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Ube2e2Q91W82 201 aa11.86□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Zfand2aQ9JII7 171 aa11.86□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Srsf12Q8C8K3 266 aa11.85□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Lypd5Q9D7Z7 256 aa11.85□□□□□ -0.51
Ctcf-201ENSMUST00000005841 MobpQ9D2P8 170 aa11.84□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Mrpl52Q9D0Y8 121 aa11.84□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Ankhd1E9PUR0 2548 aaKnown RBP11.84□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Trav9n-2A0A0G2JDP3 113 aa11.84□□□□□ -0.51
Ctcf-201ENSMUST00000005841 Serp2Q6TAW2 65 aa11.83□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Gm37988J3QM41 62 aa11.83□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Ttc28Q80XJ3 2450 aa11.82□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Gm19935A0A1B0GSF9 52 aa11.82□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Tmem258P61166 79 aa11.82□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Ppp1r32Q148A4 427 aa11.82□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Reg3gO09049 174 aa11.82□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Q99M08 65 aa11.82□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Gm3443F7CCV5 94 aa11.81□□□□□ -0.52
Ctcf-201ENSMUST00000005841 P01738 130 aa11.81□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Gm815Q3UWS2 115 aa11.81□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Gm10308Q9CVR5 141 aa11.81□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Igkv1-35A0A0G2JDE5 120 aa11.8□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Utp20Q5XG71 2788 aaKnown RBP11.8□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Prpf8Q99PV0 2335 aaKnown RBP11.79□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Ighv1-58A0A075B5W9 117 aa11.79□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Ube2d4D3YUH6 135 aa11.79□□□□□ -0.52
Ctcf-201ENSMUST00000005841 P01786 117 aa11.79□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Klk1b4P00757 256 aa11.78□□□□□ -0.52
Ctcf-201ENSMUST00000005841 H2al1aQ5M8Q2 105 aa11.78□□□□□ -0.52
Ctcf-201ENSMUST00000005841 9430015G10RikA2ASP7 199 aa11.78□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Gm20726G3UX18 150 aa11.78□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Q9DAA7 145 aa11.78□□□□□ -0.52
Ctcf-201ENSMUST00000005841 Ighv2-9A0A075B5Q5 116 aa11.77□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Igkv1-99F6XWB2 120 aa11.77□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Col6a4A2AX52 2309 aa11.77□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Zfp951A0A087WRH0 451 aa11.77□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Sprr1bQ62267 153 aa11.77□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Taf15Q8BQ46 557 aaKnown RBP11.77□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Igkv4-72A0A0B4J1I4 117 aa11.76□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Trav9d-4A0A0G2JG37 103 aa11.76□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Gpha2Q925Q5 128 aa11.76□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Akap6E9Q9K8 2307 aa11.75□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Ucn2Q99ML8 113 aa11.75□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Dynlrb2Q9DAJ5 96 aa11.75□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Igkv8-21A0A140T8P7 120 aa11.74□□□□□ -0.53
Ctcf-201ENSMUST00000005841 CnbpP53996 178 aaKnown RBP11.74□□□□□ -0.53
Ctcf-201ENSMUST00000005841 P01755 137 aa11.74□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Defb42Q8BVB5 75 aa11.74□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Trav13-4-dv7A0A075B6C2 110 aa11.73□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Ndufa12Q7TMF3 145 aaKnown RBP11.73□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Trbv30A0A0B4J1P1 111 aa11.73□□□□□ -0.53
Ctcf-201ENSMUST00000005841 MifP34884 115 aaKnown RBP11.73□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Akap13E9Q394 2776 aa11.73□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Gm9513B3GLJ6 99 aa11.72□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Tmem86bQ497J1 226 aa11.72□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Gm5142Q8C5X9 133 aa11.72□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Cspg4Q8VHY0 2327 aa11.72□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Sorl1O88307 2215 aaKnown RBP11.72□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Tmem223Q9CQE2 199 aaKnown RBP11.71□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Smlr1J3QMJ4 66 aa11.71□□□□□ -0.53
Ctcf-201ENSMUST00000005841 Gm43218A0A0G2JGT0 114 aa11.71□□□□□ -0.54
Ctcf-201ENSMUST00000005841 Gm16381A0A1Y7VKT9 73 aa11.71□□□□□ -0.54
Ctcf-201ENSMUST00000005841 Gm10320E9PW43 113 aa11.71□□□□□ -0.54
Ctcf-201ENSMUST00000005841 Gm10845Q3UNY9 185 aa11.71□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 120.7 ms