RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 SptssbQ925E8 76 aa10.77□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Col6a4A2AX52 2309 aa10.77□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Psmb8P28063 276 aa10.77□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Col4a6B1AVK5 1691 aa10.76□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Fgfbp3Q1HCM0 245 aa10.76□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 P01820 115 aa10.76□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Igkv3-5A0A140T8M6 119 aa10.76□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Rpl18aP62717 176 aaKnown RBP10.75□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Gm12689Q8BQU9 117 aa10.75□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Ebi3O35228 228 aa10.75□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Fhl1P97447 280 aaKnown RBP10.75□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Gm10735Q3US96 136 aa10.75□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Q9D8Q6 235 aa10.75□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Sprr3O09116 238 aa10.74□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Tcte2E9PY37 120 aa10.74□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Gm10401E9Q3K6 71 aa10.74□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 A130051J06RikQ8CAU1 227 aa10.73□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Eml6Q5SQM0 1958 aa10.73□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Rnf152Q8BG47 203 aa10.73□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Pla2g2dQ9WVF6 144 aa10.73□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Gm12057A0A087WR21 115 aa10.73□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Prr15lQ8JZM2 100 aa10.72□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Plxnb1Q8CJH3 2119 aa10.72□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Defb18Q30KP5 85 aa10.72□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Rnase1P00683 149 aa10.72□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Ube2aQ9Z255 152 aa10.72□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 CnfnQ6PCW6 111 aa10.71□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Ighv10-1A0A0B4J1J6 119 aa10.71□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 TshbP12656 138 aa10.71□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Reg3bP35230 175 aa10.71□□□□□ -0.69
Pcdha8-201ENSMUST00000194038 Ufsp1Q9CZP0 217 aa10.71□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Gm17521F6QAC8 156 aa10.7□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Ighv2-3A0A075B696 115 aa10.7□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Sh2d1aO88890 126 aa10.69□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Ly6gP35461 111 aa10.69□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 9530003J23RikQ8BM26 151 aa10.69□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Ighv3-3A0A0A6YWL2 116 aa10.68□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Ighv1-66A0A075B5X5 117 aa10.67□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Higd2aQ9CQJ1 106 aa10.67□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Gm10337F7DEP7 55 aa10.67□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Atox1O08997 68 aaKnown RBP10.67□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Cd27P41272 250 aa10.67□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 1700012A03RikQ9DAF1 130 aa10.67□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Pla2g2eQ9QUL3 142 aa10.67□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Abca4O35600 2310 aa10.66□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Gm10577Q3UDV9 132 aa10.66□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Tcf20Q9EPQ8 1987 aa10.66□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 P06320 134 aa10.66□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Polr2kQ63871 58 aa10.66□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Gm19935A0A1B0GSF9 52 aa10.65□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Edn2P22389 175 aa10.65□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Nup210Q9QY81 1886 aaKnown RBP10.65□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 9430015G10RikA2ASP7 199 aa10.65□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Gm10322F7D7I4 111 aa10.65□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 P01823 113 aa10.65□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Lmo4P61969 165 aa10.65□□□□□ -0.7
Pcdha8-201ENSMUST00000194038 Ighv1-62-1A0A075B5U3 116 aa10.65□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Ighv1-5A0A0A6YWG2 117 aa10.65□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Igkv3-10A0A0G2JGN0 119 aa10.65□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Gm9805F6YK59 57 aa10.65□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 A830031A19RikQ8BNT5 113 aa10.65□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Gm9913Q8BQQ2 135 aa10.65□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Notch3Q61982 2318 aa10.64□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 A830005F24RikQ8BRT5 167 aa10.64□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 H2al1bA0A087WP11 105 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Fgf23Q9EPC2 251 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Arid1bE9Q4N7 2244 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Sec16aA2AIX1 2377 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Sec61gP60060 68 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Pla2g2aP31482 146 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Smrp1Q2MH31 260 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 E130116L18RikQ8BMV6 101 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 B430305J03RikQ8BQQ8 176 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Gm16223Q8CBM3 117 aa10.63□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Ndufb1P0DN34 57 aa10.62□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 5730596B20RikQ8BQ08 205 aa10.62□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Spry2Q9QXV8 315 aa10.62□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 1110002E22RikE0CYV9 1786 aa10.62□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Igkv4-92A0A0B4J1I2 117 aa10.62□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Cox7bP56393 80 aa10.62□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 CenpeQ6RT24 2474 aaKnown RBP10.61□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Ndufs5Q99LY9 106 aa10.61□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Gvin1Q80SU7 2427 aa10.61□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Plac8l1Q08EJ0 177 aa10.61□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Ighv8-11A0A075B5X4 119 aa10.61□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Arhgef17Q80U35 2057 aa10.61□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Ncor1Q60974 2453 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Ighv1-63A0A075B5X2 117 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 P01729 129 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 NpwA0A1L1STR8 176 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Gm20604F8WIA3 75 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Ube2d1P61080 147 aaKnown RBP10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 2010109I03RikQ9CQ11 111 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 4930535I16RikQ9CUI2 172 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Dscaml1Q4VA61 2053 aa10.6□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Gm10226O88253 85 aa10.59□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Fam19a1Q7TPG8 133 aa10.59□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Sdk2Q6V4S5 2176 aa10.59□□□□□ -0.71
Pcdha8-201ENSMUST00000194038 Tet1Q3URK3 2007 aaKnown RBP10.58□□□□□ -0.72
Pcdha8-201ENSMUST00000194038 F5O88783 2183 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 64.4 ms