RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Med12A2AGH6 2190 aa9.35□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ighv2-6-8A0A0A6YWY9 116 aa9.35□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Heatr5aQ5PRF0 2038 aa9.35□□□□□ -0.91
Ssh1-202ENSMUST00000112298 PkdrejQ9Z0T6 2126 aa9.35□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Q9DAQ5 155 aa9.35□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Igkv3-3A0A140T8Q0 119 aa9.34□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Lmo4P61969 165 aa9.34□□□□□ -0.91
Ssh1-202ENSMUST00000112298 P01659 112 aa9.34□□□□□ -0.91
Ssh1-202ENSMUST00000112298 FcorP0DJI6 106 aa9.34□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Col4a6B1AVK5 1691 aa9.34□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ighv1-63A0A075B5X2 117 aa9.34□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Rp1l1Q8CGM2 1859 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Igkv8-21A0A140T8P7 120 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Plac8l1Q08EJ0 177 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Plxnb1Q8CJH3 2119 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Vpreb1P13372 142 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Ighv2-3A0A075B696 115 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Gm10647E9Q8X0 124 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Sh2d1aO88890 126 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Prr15lQ8JZM2 100 aa9.33□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Znf239P24399 201 aa9.32□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Ighv1-5A0A0A6YWG2 117 aa9.32□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Ighv8-5A0A0A6YY60 119 aa9.32□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Q8K1L6 76 aa9.32□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Ypel4Q65Z93 127 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 A830005F24RikQ8BRT5 167 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Defb13Q8R2I4 64 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Fgf23Q9EPC2 251 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Rnf152Q8BG47 203 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Prpf8Q99PV0 2335 aaKnown RBP9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 TncQ80YX1 2110 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 E130114P18RikF6S0S7 154 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Atox1O08997 68 aaKnown RBP9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Rnf185Q91YT2 192 aa9.31□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Col6a4A2AX52 2309 aa9.3□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Igkv4-92A0A0B4J1I2 117 aa9.3□□□□□ -0.92
Ssh1-202ENSMUST00000112298 P18527 97 aa9.3□□□□□ -0.92
Ssh1-202ENSMUST00000112298 A130051J06RikQ8CAU1 227 aa9.3□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Cox7bP56393 80 aa9.3□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Ndufb1P0DN34 57 aa9.3□□□□□ -0.92
Ssh1-202ENSMUST00000112298 EnhoQ8K1D8 76 aa9.29□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Gm10226O88253 85 aa9.29□□□□□ -0.92
Ssh1-202ENSMUST00000112298 P06320 134 aa9.29□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Ly6hQ9WUC3 139 aa9.29□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Gm9805F6YK59 57 aa9.29□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Jmjd1cQ69ZK6 2350 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Col8a2P25318 699 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 U90926O08546 118 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Q9D8Q6 235 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Eml6Q5SQM0 1958 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Tcf20Q9EPQ8 1987 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Cox8cA6H666 72 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Chchd7Q8K2Q5 85 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Psmb8P28063 276 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 FshbQ60687 130 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 E130116L18RikQ8BMV6 101 aa9.28□□□□□ -0.92
Ssh1-202ENSMUST00000112298 C1qcQ02105 246 aa9.27□□□□□ -0.92
Ssh1-202ENSMUST00000112298 Wipf1Q8K1I7 493 aa9.27□□□□□ -0.92
Ssh1-202ENSMUST00000112298 H2al1bA0A087WP11 105 aa9.27□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Ighv3-3A0A0A6YWL2 116 aa9.26□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Serp2Q6TAW2 65 aa9.26□□□□□ -0.93
Ssh1-202ENSMUST00000112298 1110002E22RikE0CYV9 1786 aa9.26□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Ly6c2P0CW03 131 aa9.26□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Esm1Q9QYY7 184 aa9.26□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Wdr38Q9D994 303 aa9.25□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Gm10322F7D7I4 111 aa9.25□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Dopey2Q3UHQ6 2295 aa9.25□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Nup210Q9QY81 1886 aaKnown RBP9.25□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Ncoa6Q9JL19 2067 aa9.25□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Ighv1-66A0A075B5X5 117 aa9.25□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Ighv1-59A0A0A6YXE0 117 aa9.25□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Wfdc10Q3V2J9 124 aa9.24□□□□□ -0.93
Ssh1-202ENSMUST00000112298 BaalcQ8VHV1 145 aa9.24□□□□□ -0.93
Ssh1-202ENSMUST00000112298 CadB2RQC6 2225 aa9.24□□□□□ -0.93
Ssh1-202ENSMUST00000112298 CenpwQ3URR0 86 aa9.24□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Ndufs5Q99LY9 106 aa9.24□□□□□ -0.93
Ssh1-202ENSMUST00000112298 TshbP12656 138 aa9.24□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Gm10577Q3UDV9 132 aa9.24□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Igkv1-117A0A140T8M0 119 aa9.23□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Gm12689Q8BQU9 117 aa9.23□□□□□ -0.93
Ssh1-202ENSMUST00000112298 CnfnQ6PCW6 111 aa9.23□□□□□ -0.93
Ssh1-202ENSMUST00000112298 5730596B20RikQ8BQ08 205 aa9.23□□□□□ -0.93
Ssh1-202ENSMUST00000112298 ColqO35348 457 aa9.23□□□□□ -0.93
Ssh1-202ENSMUST00000112298 2010109I03RikQ9CQ11 111 aa9.23□□□□□ -0.93
Ssh1-202ENSMUST00000112298 CenpeQ6RT24 2474 aaKnown RBP9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Ighv1-62-1A0A075B5U3 116 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Smim1P0C8K7 78 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Arhgef17Q80U35 2057 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Obox2E9PXV9 151 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Abca4O35600 2310 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 1520401A03RikA0A0J9YVH6 598 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 PlaurP35456 327 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Tcl1b5P56845 121 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Usf3B2RUQ2 2221 aa9.22□□□□□ -0.93
Ssh1-202ENSMUST00000112298 NrgnP60761 78 aa9.21□□□□□ -0.93
Ssh1-202ENSMUST00000112298 H2al1aQ5M8Q2 105 aa9.21□□□□□ -0.93
Ssh1-202ENSMUST00000112298 H2al1eQ810S6 105 aa9.21□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Znf706Q9D115 76 aaKnown RBP9.21□□□□□ -0.93
Ssh1-202ENSMUST00000112298 Wfdc15aQ8BH89 80 aa9.21□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Igkv1-110A0A0B4J1I0 119 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms