RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Gm5819E9PZ96 154 aa12.55□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Gm10135F6TEE5 83 aa12.55□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Ly6gP35461 111 aa12.55□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Ifi27l2aQ8R412 90 aa12.55□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Trbv30A0A0B4J1P1 111 aa12.54□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Klk1b4P00757 256 aa12.54□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Zc2hc1bQ9D534 172 aa12.54□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Gm9887F6RFI0 207 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Gm9936Q8C864 160 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Lgals4Q8K419 326 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 4930470P17RikQ9D542 155 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Ighv1-11A0A0A6YWI9 117 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Cks1bP61025 79 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Rmi2Q3UPE3 149 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Trav7d-3Q5R1I1 112 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Rbmy1bQ60990 380 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Gatd1Q8BFQ8 220 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 Ucn2Q99ML8 113 aa12.53□□□□□ -0.4
Ddx28-201ENSMUST00000058579 P01786 117 aa12.51□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Ang3P97802 145 aa12.51□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Myo9aQ8C170 2542 aa12.51□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Gm20730A0A075B5J6 119 aa12.51□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Gm11444F6QMA6 170 aa12.51□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Mast4Q811L6 2618 aa12.51□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Igkv4-91A0A075B5L2 119 aa12.5□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Nav3Q80TN7 2359 aa12.5□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Trdv5A0A075B661 115 aa12.5□□□□□ -0.41
Ddx28-201ENSMUST00000058579 2310009B15RikA0A0A6YWI4 143 aa12.5□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Ighv1-72P01751 139 aa12.5□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Fam110dQ80X91 271 aa12.5□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Igkv4-78A0A0A6YYE5 119 aa12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Trav9n-2A0A0G2JDP3 113 aa12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Gm10322F7D7I4 111 aa12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Srp14P16254 110 aaKnown RBP12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Gm815Q3UWS2 115 aa12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Q9DAQ5 155 aa12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Trav13d-1A0A075B606 110 aa12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Ankrd17Q99NH0 2603 aaKnown RBP12.49□□□□□ -0.41
Ddx28-201ENSMUST00000058579 P01738 130 aa12.48□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Gm9747Q810H1 104 aa12.48□□□□□ -0.41
Ddx28-201ENSMUST00000058579 4930442H23RikQ9D5G7 103 aa12.48□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Arid1bE9Q4N7 2244 aa12.48□□□□□ -0.41
Ddx28-201ENSMUST00000058579 ColqO35348 457 aa12.48□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Anapc13Q8R034 74 aa12.48□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Scgb1b24B1B0N6 92 aa12.47□□□□□ -0.41
Ddx28-201ENSMUST00000058579 TrrapQ80YV3 2565 aaKnown RBP12.47□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Prelid3aQ8VE85 172 aa12.46□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Unc79Q0KK59 2596 aa12.46□□□□□ -0.41
Ddx28-201ENSMUST00000058579 Trav4-3A0A0B4J1K1 110 aa12.46□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Defb2P82020 71 aa12.46□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Fgf23Q9EPC2 251 aa12.46□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Gm3443F7CCV5 94 aa12.45□□□□□ -0.42
Ddx28-201ENSMUST00000058579 4930415O20RikQ8CDT5 131 aa12.45□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Dmbt1Q60997 2085 aa12.45□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Glrp1E9Q9S8 174 aa12.45□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Rnf183Q8QZS5 190 aa12.45□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Trav4d-3A0A075B625 110 aa12.44□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Smim10l1A0A087WNQ7 89 aa12.44□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Gm8439G3UWA7 96 aa12.44□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Timm17bQ9Z0V7 172 aa12.44□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Gm29423A0A087WRM1 55 aa12.44□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Gm17472A0A075B683 117 aa12.43□□□□□ -0.42
Ddx28-201ENSMUST00000058579 1700020N15RikL7MTX3 112 aa12.43□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Eif4ebp1Q60876 117 aa12.43□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Hivep2Q3UHF7 2430 aa12.43□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Rnf152Q8BG47 203 aa12.42□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Tmem101Q91VP7 257 aa12.42□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Avpi1Q9D7H4 142 aa12.42□□□□□ -0.42
Ddx28-201ENSMUST00000058579 BC067074F6RXI4 2391 aa12.42□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Q99M08 65 aa12.42□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Smrp1Q2MH31 260 aa12.41□□□□□ -0.42
Ddx28-201ENSMUST00000058579 H1fxQ80ZM5 188 aa12.41□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Chd9Q8BYH8 2885 aa12.41□□□□□ -0.42
Ddx28-201ENSMUST00000058579 CenpwQ3URR0 86 aa12.41□□□□□ -0.42
Ddx28-201ENSMUST00000058579 MrapQ9D159 127 aa12.41□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Notch3Q61982 2318 aa12.41□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Nf1Q04690 2841 aa12.4□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Gm9513B3GLJ6 99 aa12.4□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Atp5g3P56384 141 aa12.4□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Chd6A3KFM7 2711 aa12.4□□□□□ -0.42
Ddx28-201ENSMUST00000058579 Pdzd2E9Q1M1 2796 aa12.38□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Rnase1P00683 149 aa12.38□□□□□ -0.43
Ddx28-201ENSMUST00000058579 4930432M17RikQ3V0W9 174 aa12.38□□□□□ -0.43
Ddx28-201ENSMUST00000058579 CubnQ9JLB4 3623 aa12.38□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Gm10542F6XDR3 90 aa12.37□□□□□ -0.43
Ddx28-201ENSMUST00000058579 P01823 113 aa12.37□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Ube2wQ8VDW4 151 aa12.37□□□□□ -0.43
Ddx28-201ENSMUST00000058579 FlnaQ8BTM8 2647 aaKnown RBP12.37□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Trav7-6A0A075B640 112 aa12.37□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Gm11020F6ZGD5 61 aa12.37□□□□□ -0.43
Ddx28-201ENSMUST00000058579 CirbpP60824 172 aaKnown RBP12.37□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Gm5089A1L3C8 106 aa12.36□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Cox6cQ9CPQ1 76 aa12.36□□□□□ -0.43
Ddx28-201ENSMUST00000058579 BsnO88737 3942 aa12.36□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Ank2Q8C8R3 3898 aa12.36□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Gm7849D3YX03 116 aa12.36□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Eif4ebp3Q80VV3 101 aa12.36□□□□□ -0.43
Ddx28-201ENSMUST00000058579 1700010B08RikQ9DAI7 102 aa12.35□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Igkv4-79A0A075B5L8 119 aa12.35□□□□□ -0.43
Ddx28-201ENSMUST00000058579 Ighv1-61P01749 117 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms