RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Timm17aQ9Z0V8 171 aa13.03□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Ighv8-12A0A0G2JDE1 119 aa13.03□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Gm815Q3UWS2 115 aa13.03□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Il1f10Q8R459 152 aa13.02□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Morn5Q9DAI9 170 aa13.01□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Ighv1-85A0A075B5Y6 117 aa13.01□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Gm29423A0A087WRM1 55 aa13.01□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Trav7d-3Q5R1I1 112 aa13.01□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Dmbt1Q60997 2085 aa13.01□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Gm10542F6XDR3 90 aa13□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Ly86O88188 162 aa13□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Gm10135F6TEE5 83 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 4930415O20RikQ8CDT5 131 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Smim10l1A0A087WNQ7 89 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Ccl21aP84444 133 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 P84751 237 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Ccl21bP86792 133 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Ccl21cP86793 133 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 LbhQ9CX60 105 aa12.99□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Gm5089A1L3C8 106 aa12.98□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Defb26Q30KN7 186 aa12.98□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Spata45Q9CVW4 97 aa12.98□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Q9DAQ5 155 aa12.98□□□□□ -0.33
Ptpra-201ENSMUST00000028769 P01896 185 aa12.97□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Cfap126Q6P8X9 189 aa12.97□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Ucn2Q99ML8 113 aa12.97□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Cryba4Q9JJV0 196 aa12.97□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Trav13n-1A0A0G2JEU8 110 aa12.97□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Gm10322F7D7I4 111 aa12.97□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Trav3-1Q5R1I8 114 aa12.97□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Trav4n-4A0A075B615 110 aa12.96□□□□□ -0.33
Ptpra-201ENSMUST00000028769 P01738 130 aa12.96□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Ang3P97802 145 aa12.96□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Tac4Q99N14 128 aa12.96□□□□□ -0.33
Ptpra-201ENSMUST00000028769 Gm10300Q8C8P7 189 aa12.96□□□□□ -0.33
Ptpra-201ENSMUST00000028769 P01786 117 aa12.96□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Gata1P17679 413 aa12.96□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Ighv5-9-1A0A0A6YVS4 126 aa12.95□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Trbv30A0A0B4J1P1 111 aa12.95□□□□□ -0.34
Ptpra-201ENSMUST00000028769 NpwA0A1L1STR8 176 aa12.95□□□□□ -0.34
Ptpra-201ENSMUST00000028769 PrlhG3UWC3 86 aa12.95□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Ube2d3P61079 147 aa12.95□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Ube2d2P62838 147 aa12.95□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Rnf183Q8QZS5 190 aa12.94□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Ighv8-5A0A0A6YY60 119 aa12.94□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Gm3250E9Q1M3 230 aa12.94□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Bri3P28662 125 aa12.94□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Igkv4-78A0A0A6YYE5 119 aa12.94□□□□□ -0.34
Ptpra-201ENSMUST00000028769 4930564D02RikQ9D4S4 103 aa12.94□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Phlda3Q9WV95 125 aa12.93□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Ighv1-63A0A075B5X2 117 aa12.93□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Rbmy1bQ60990 380 aa12.92□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Rpl35aO55142 110 aa12.92□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Fam216aQ9DB54 251 aa12.92□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Trav7-6A0A075B640 112 aa12.92□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Atp5g3P56384 141 aa12.92□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Znf740Q6NZQ6 180 aa12.92□□□□□ -0.34
Ptpra-201ENSMUST00000028769 4930544G11RikQ9CR99 193 aa12.92□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Tcrg-C1A0A075B5Z0 172 aa12.91□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Lyrm7Q9DA03 104 aa12.91□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Cdip1Q9DB75 208 aa12.91□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Cks1bP61025 79 aa12.91□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Anapc13Q8R034 74 aa12.91□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Krtap26-1Q9D7N2 215 aa12.9□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Rpl32P62911 135 aaKnown RBP12.9□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Ifi27l2aQ8R412 90 aa12.9□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Trav9d-3A0A075B695 113 aa12.9□□□□□ -0.34
Ptpra-201ENSMUST00000028769 Fgf23Q9EPC2 251 aa12.89□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Sh2d1aO88890 126 aa12.88□□□□□ -0.35
Ptpra-201ENSMUST00000028769 P01729 129 aa12.88□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Gm7075D3Z497 112 aa12.87□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Gm3443F7CCV5 94 aa12.87□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Rpl32-psP17932 135 aa12.87□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Gm10509O88255 85 aa12.87□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Fam110dQ80X91 271 aa12.87□□□□□ -0.35
Ptpra-201ENSMUST00000028769 GalmQ8K157 342 aa12.87□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Nop10Q9CQS2 64 aa12.87□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Gm10251J3QPM5 127 aa12.86□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Eif4ebp3Q80VV3 101 aa12.86□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Spink10Q8CAC8 162 aa12.86□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Igkv4-68A0A0B4J1I7 117 aa12.86□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Tex15F8VPN2 2785 aa12.86□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Prh1P05142 261 aa12.86□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Glrp1E9Q9S8 174 aa12.85□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Gm10767Q3TQP0 103 aa12.85□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Atp5g1Q9CR84 136 aa12.85□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Psmb8P28063 276 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Gm9887F6RFI0 207 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Gm9747Q810H1 104 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Prelid3aQ8VE85 172 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Znf580Q9DB38 172 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Hspg2Q05793 3707 aaKnown RBP12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Col7a1Q63870 2944 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Cfc1P97766 202 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Mast4Q811L6 2618 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Bles03Q8VD62 251 aa12.84□□□□□ -0.35
Ptpra-201ENSMUST00000028769 BsnO88737 3942 aa12.83□□□□□ -0.35
Ptpra-201ENSMUST00000028769 Ighv1-5A0A0A6YWG2 117 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 3110070M22RikQ9DAQ7 118 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Rnase1P00683 149 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms