RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 2010109I03RikQ9CQ11 111 aa10.1□□□□□ -0.79
Ercc1-201ENSMUST00000003645 EsdQ9R0P3 282 aa10.1□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Ighv1-11A0A0A6YWI9 117 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Esp34G3UXG0 151 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 FcorP0DJI6 106 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Gng4P50153 75 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Cox11Q6P8I6 275 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Tmem88Q9D0N8 159 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Dync2h1Q45VK7 4306 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Dnah1E9Q8T7 4250 aa10.09□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Gm9513B3GLJ6 99 aa10.08□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Plac8l1Q08EJ0 177 aa10.08□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Q5BN45 167 aa10.08□□□□□ -0.8
Ercc1-201ENSMUST00000003645 P03985 172 aa10.07□□□□□ -0.8
Ercc1-201ENSMUST00000003645 PlnP61014 52 aa10.07□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Vamp3P63024 103 aa10.07□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Snhg11Q4G0K9 87 aa10.07□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Card19Q9D1I2 183 aa10.07□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Trav12-3A0A075B648 115 aa10.06□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Gm21693J3QK27 380 aa10.06□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Gm9747Q810H1 104 aa10.06□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Ndufv3Q8BK30 104 aaKnown RBP10.06□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Gm9918Q8BUR5 174 aa10.06□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Cryba4Q9JJV0 196 aa10.06□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Cited4Q9WUL8 182 aa10.06□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Gm45785A0A1B0GT05 94 aa10.05□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Defa6P50704 93 aa10.05□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Defa35E9QLQ1 93 aa10.04□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Fam19a4Q7TPG5 135 aa10.04□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Atxn7l1Q9CZ05 146 aa10.04□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Defa30E9QPZ2 93 aa10.03□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Odf3l2Q3TZ65 277 aa10.03□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Cdc42se2Q8BGH7 84 aa10.03□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Tm2d2Q8R0I4 213 aa10.03□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Timm17aQ9Z0V8 171 aa10.03□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Zfp951A0A087WRH0 451 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Esp4A8R0T8 117 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Gm9507D3Z5T3 223 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Igll1P20764 209 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Defa2P28309 93 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Rbx1P62878 108 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 H2al1nQ497L1 109 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Tomm7Q9D173 55 aa10.02□□□□□ -0.8
Ercc1-201ENSMUST00000003645 Ighv2-6-8A0A0A6YWY9 116 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Igkv1-99F6XWB2 120 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Ighv1-72P01751 139 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 E130208F15RikQ3UPV3 143 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 RfxapQ8VCG9 231 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Tomm6Q9CQN3 74 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Higd1aQ9JLR9 95 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Psmb2Q9R1P3 201 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Ighv8-8A0A0A6YXQ0 119 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 MobpQ9D2P8 170 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 2310061N02RikQ9D6S9 174 aa10.01□□□□□ -0.81
Ercc1-201ENSMUST00000003645 TcraP01849 138 aa10□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Prss29Q99MS4 279 aa10□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Lcn2P11672 200 aa9.99□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Rab24P35290 203 aa9.99□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Zfand2bQ91X58 257 aa9.99□□□□□ -0.81
Ercc1-201ENSMUST00000003645 3110070M22RikQ9DAQ7 118 aa9.99□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Igkv4-79A0A075B5L8 119 aa9.98□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Igkv3-9A0A140T8P4 119 aa9.98□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Grcc10O35127 126 aa9.98□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Cib3Q0P523 160 aa9.98□□□□□ -0.81
Ercc1-201ENSMUST00000003645 PemtQ61907 199 aa9.98□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Gm4861Q8C5A4 106 aa9.98□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Gm10130F6ZHM5 101 aa9.97□□□□□ -0.81
Ercc1-201ENSMUST00000003645 P01794 123 aa9.97□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Reg3bP35230 175 aa9.97□□□□□ -0.81
Ercc1-201ENSMUST00000003645 OxtP35454 125 aa9.97□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Chac1Q8R3J5 223 aa9.97□□□□□ -0.81
Ercc1-201ENSMUST00000003645 FasnP19096 2504 aaKnown RBP9.96□□□□□ -0.81
Ercc1-201ENSMUST00000003645 Aqp7O54794 303 aa9.96□□□□□ -0.82
Ercc1-201ENSMUST00000003645 PolP10400 120 aa9.96□□□□□ -0.82
Ercc1-201ENSMUST00000003645 P18527 97 aa9.96□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Tmem170bP86050 132 aa9.96□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Cox7a2lQ61387 111 aa9.96□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Malsu1Q9CWV0 228 aa9.96□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Ctxnd2A0A1B0GQX3 59 aa9.95□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Gm45521A0A1B0GRK0 198 aa9.95□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Tfpi2O35536 230 aa9.95□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Ube2d1P61080 147 aaKnown RBP9.94□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Tm4sf20Q9CQY8 226 aa9.94□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Fam213bQ9DB60 201 aa9.94□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Stab2Q8R4U0 2559 aa9.94□□□□□ -0.82
Ercc1-201ENSMUST00000003645 SpxD3Z752 116 aa9.93□□□□□ -0.82
Ercc1-201ENSMUST00000003645 4930546C10RikE9Q4Y3 121 aa9.93□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Gm9376G3UW68 176 aa9.93□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Ifitm10Q8BR26 201 aa9.93□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Dnah7bL7N1Y0 4068 aa9.93□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Igkv2-137A0A0B4J1H6 120 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Trdv2-1A0A0G2JGB9 116 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Cox8bP48772 70 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Cfap126Q6P8X9 189 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 EnhoQ8K1D8 76 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Josd1Q9DBJ6 202 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 HilpdaQ9JLS0 64 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Fras1Q80T14 4010 aa9.92□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Igkv3-1A0A075B5P1 119 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Bak1O08734 209 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms