RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Smdt1Q9DB10 107 aa5.95□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Ighv1-5A0A0A6YWG2 117 aa5.95□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Mbd6Q3TY92 1003 aa5.95□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Ighv1-53A0A075B5W3 117 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Gm15217A2CG07 155 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 P01748 117 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Ighv1-72P01751 139 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Igkv8-27A0A0G2JF28 120 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 P01755 137 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Loxl1P97873 607 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 1700008P02RikQ9DAJ8 175 aa5.94□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 P01660 111 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Gbf1Q6DFZ1 1861 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 AplnQ9R0R4 77 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 C4bP01029 1738 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Tubgcp6G5E8P0 1769 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 AngP21570 145 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Bean1Q9EQG5 255 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Abca1P41233 2261 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Wfdc2Q9DAU7 174 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Ighv2-3A0A075B696 115 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 D730001G18RikA0A087WQU7 115 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Fam208bQ5DTT3 2382 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Defb50Q6TU36 73 aa5.93□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 TprF6ZDS4 2431 aaKnown RBP5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Pnrc2Q9CR73 140 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 A830005F24RikQ8BRT5 167 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 BaalcQ8VHV1 145 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Zswim8Q3UHH1 1832 aaKnown RBP5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Gm20499D3Z4G5 72 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Spaca4Q80ZQ0 127 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 A230072I06RikQ3UUJ8 172 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Lamtor2Q9JHS3 125 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Trav12-3A0A075B648 115 aa5.92□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Csdc2Q91YQ3 154 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 PtprfA2A8L5 1898 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Ube2v1Q9CZY3 147 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Qrich2A0A140LIY9 2337 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 P01668 110 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Prr14lE9Q7C4 1971 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Obsl1D3YYU8 1804 aaKnown RBP5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Trav11A0A0B4J1J9 114 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Alms1Q8K4E0 3251 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Gm3285A0A1W2P7U0 201 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Q99M08 65 aa5.91□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Gm7137J3QMW1 236 aa5.9□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Gm16485Q8C4B7 115 aa5.9□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Malrd1A2AJX4 2123 aa5.9□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Kmt2eQ3UG20 1868 aa5.9□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Cend1Q9JKC6 149 aa5.9□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Col11a1Q61245 1804 aa5.9□□□□□ -1.46
Rc3h1-202ENSMUST00000161609 Med13lQ6JPI3 2207 aa5.9□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm42674D3YUT9 64 aa5.9□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Lypd1Q8BLC3 141 aa5.9□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Cdip1Q9DB75 208 aa5.9□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm11011D3Z3L9 86 aa5.9□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 9230109A22RikQ8BHE6 111 aa5.9□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Q08AU9 97 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Cul9Q80TT8 1865 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Psme4Q5SSW2 1843 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Rpl28P41105 137 aaKnown RBP5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 P01649 108 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 P01667 111 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Tanc2A2A690 1994 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 RlfA2A7F4 1918 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Ighv8-11A0A075B5X4 119 aa5.89□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Usf3B2RUQ2 2221 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Ltbp2O08999 1813 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Ypel3P61237 119 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm9903Q8C9Y8 129 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 P01659 112 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 EnhoQ8K1D8 76 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Siglec1Q62230 1695 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm9805F6YK59 57 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm5617Q91VN2 117 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Zic4Q61467 341 aa5.88□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm33815A0A087WNV3 176 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Nup98Q6PFD9 1816 aaKnown RBP5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Odf3l1Q810P2 275 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 AcacaQ5SWU9 2345 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Ubr2Q6WKZ8 1755 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Inafm1E9PV59 130 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm10999F6Q4M4 69 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Myo5aQ99104 1853 aaKnown RBP5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 A830031A19RikQ8BNT5 113 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Zfp646Q6NV66 1788 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 A730009L09RikA0A1B0GS82 72 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 P01664 111 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm10762Q9CZN6 115 aa5.87□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Dkk4Q8VEJ3 221 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Smim20D3Z7Q2 69 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Fgf23Q9EPC2 251 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Ormdl1Q921I0 153 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Pxt1Q8K459 51 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Gm45861A0A1B0GRY3 1923 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Pkd1l3Q2EG98 2201 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 9130213A22RikQ3V3T2 120 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Ighv1-85A0A075B5Y6 117 aa5.86□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Ralgapa2A3KGS3 1872 aa5.85□□□□□ -1.47
Rc3h1-202ENSMUST00000161609 Dock3Q8CIQ7 2027 aa5.85□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms