RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Tm2d2Q8R0I4 213 aa13.56□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Cacna1gQ5SUF7 2381 aa13.56□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Ormdl1Q921I0 153 aa13.56□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Fam208bQ5DTT3 2382 aa13.55□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Ighv1-85A0A075B5Y6 117 aa13.55□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Igkv4-74A0A0B4J1I3 119 aa13.55□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm5629P06327 117 aa13.55□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Rnf185Q91YT2 192 aa13.55□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Sdk2Q6V4S5 2176 aa13.55□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gphb5Q812B2 130 aa13.54□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Timm17bQ9Z0V7 172 aa13.54□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 CadB2RQC6 2225 aa13.54□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 CnfnQ6PCW6 111 aa13.54□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Trav13n-1A0A0G2JEU8 110 aa13.54□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Ighv8-5A0A0A6YY60 119 aa13.53□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Smim20D3Z7Q2 69 aa13.53□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Crybg1A0A0G2JG52 2065 aa13.53□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Defb18Q30KP5 85 aa13.53□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm28539A0A087WSL9 92 aa13.52□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm12353A2AGJ4 60 aa13.52□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Tcte2E9PY37 120 aa13.52□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Cox7a1P56392 80 aa13.52□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 A130051J06RikQ8CAU1 227 aa13.52□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Ndufc1Q9CQY9 76 aa13.52□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm12689Q8BQU9 117 aa13.52□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Sprr3O09116 238 aa13.52□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 P01820 115 aa13.52□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Tcl1b3P56842 122 aa13.52□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Ncoa6Q9JL19 2067 aa13.52□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Spink8Q09TK9 105 aa13.51□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 B430305J03RikQ8BQQ8 176 aa13.51□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Fgfbp3Q1HCM0 245 aa13.51□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Sptan1P16546 2472 aaKnown RBP13.51□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Trav13d-1A0A075B606 110 aa13.51□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Ighv2-6-8A0A0A6YWY9 116 aa13.5□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 PrcdQ00LT2 53 aa13.5□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Spata25Q9DA57 226 aa13.5□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Gm10518F6UQQ9 182 aa13.5□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 AgrnA2ASQ1 1950 aa13.5□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Ppp1r32Q148A4 427 aa13.5□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Fam110dQ80X91 271 aa13.49□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Prp2P05143 317 aa13.49□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Eml6Q5SQM0 1958 aa13.49□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Igkv4-58A0A0G2JGI6 119 aa13.48□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Col8a2P25318 699 aa13.48□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Cox7b2Q9D2H1 82 aa13.48□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Ighv8-12A0A0G2JDE1 119 aa13.48□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Gata1P17679 413 aa13.48□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Ighv13-2A0A0A6YWN3 119 aa13.48□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 MifP34884 115 aaKnown RBP13.47□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Klk11Q9QYN3 276 aa13.47□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Trav13d-4A0A0G2JFX3 110 aa13.47□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 P18527 97 aa13.47□□□□□ -0.25
Col4a3bp-202ENSMUST00000109444 Igf1P05017 153 aa13.46□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Lmo4P61969 165 aa13.46□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Gm17472A0A075B683 117 aa13.45□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 P01747 120 aa13.45□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Q9DAQ5 155 aa13.45□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Cox8cA6H666 72 aa13.45□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 FcorP0DJI6 106 aa13.45□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Fer1l4A3KGK3 1992 aa13.44□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 P01745 121 aa13.44□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Ighv3-3A0A0A6YWL2 116 aa13.44□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Smim1P0C8K7 78 aa13.44□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Brk1Q91VR8 75 aa13.44□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 4930470P17RikQ9D542 155 aa13.44□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Vpreb2P13373 142 aa13.43□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Igkv1-122A0A140T8M9 119 aa13.43□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Gm10542F6XDR3 90 aa13.43□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Ighv1-66A0A075B5X5 117 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Rnase1P00683 149 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Arfgef3Q3UGY8 2170 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Ly6gP35461 111 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 P84751 237 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 BtcQ05928 177 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 E130116L18RikQ8BMV6 101 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Ebi3O35228 228 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Wdr90Q6ZPG2 1874 aa13.42□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Pou2af1Q64693 256 aa13.41□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Pip4p1Q3TWL2 284 aa13.41□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Pcnx3Q8VI59 2028 aa13.41□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Pla2g2aP31482 146 aa13.4□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Prpf8Q99PV0 2335 aaKnown RBP13.4□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Igkv1-35A0A0G2JDE5 120 aa13.4□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Ube2bP63147 152 aa13.4□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Fhl1P97447 280 aaKnown RBP13.4□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Ucn2Q99ML8 113 aa13.4□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Zc2hc1bQ9D534 172 aa13.4□□□□□ -0.26
Col4a3bp-202ENSMUST00000109444 Camk2n2Q78WH7 79 aa13.4□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Ighv2-3A0A075B696 115 aa13.39□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Trav13-4-dv7A0A075B6C2 110 aa13.39□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Adamts20P59511 1906 aa13.39□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Wipf1Q8K1I7 493 aa13.39□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Gm10251J3QPM5 127 aa13.39□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Q9D8Q6 235 aa13.39□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Gm2916Q9D9B9 127 aa13.39□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Igkv2-109A0A075B5K6 120 aa13.38□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 TshbP12656 138 aa13.38□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Rpl39lQ9CQD0 51 aa13.38□□□□□ -0.27
Col4a3bp-202ENSMUST00000109444 Notch4P31695 1964 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms