RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Gm20708H3BKF4 155 aa5.21□□□□□ -1.57
Scn8a-205ENSMUST00000108910 Cox7a1P56392 80 aa5.21□□□□□ -1.57
Scn8a-205ENSMUST00000108910 9930022D16RikQ8BG27 128 aa5.21□□□□□ -1.57
Scn8a-205ENSMUST00000108910 Ndufb4Q9CQC7 129 aa5.21□□□□□ -1.57
Scn8a-205ENSMUST00000108910 Stab1Q8R4Y4 2571 aa5.21□□□□□ -1.57
Scn8a-205ENSMUST00000108910 Spry4Q9WTP2 300 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm20604F8WIA3 75 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Plscr4P58196 326 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Foxc1Q61572 553 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Igkv8-26A0A075B5N5 123 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Cox7cP17665 63 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Rpl39P62892 51 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Bub3Q9WVA3 326 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 C920008G01RikA0A0B4J1N1 112 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ang3P97802 145 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 PemtQ61907 199 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 1110002E22RikE0CYV9 1786 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Col5a3Q9JLI2 1739 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm9913Q8BQQ2 135 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 CstadQ9D245 104 aa5.21□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm15128A2ADW8 449 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Fhl1P97447 280 aaKnown RBP5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm15217A2CG07 155 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Pla2g2aP31482 146 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Cfap126Q6P8X9 189 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Tm2d2Q8R0I4 213 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Rbm3O89086 153 aaKnown RBP5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ucn2Q99ML8 113 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Tnfrsf23Q9ER63 176 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Col8a2P25318 699 aa5.2□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Lrp4Q8VI56 1905 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Timm17aQ9Z0V8 171 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm10251J3QPM5 127 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm2916Q9D9B9 127 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav13d-4A0A0G2JFX3 110 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm10518F6UQQ9 182 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ighv2-7A0A075B5Q8 116 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Atp5g3P56384 141 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Atp5g1Q9CR84 136 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ighv3-1A0A075B5S6 116 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Mrpl35Q9CQL6 188 aa5.19□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav13n-1A0A0G2JEU8 110 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm15557A6PWY0 234 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ly6g5bQ8K1T4 194 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Tmem258P61166 79 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav4-3A0A0B4J1K1 110 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Vsig4F6TUL9 280 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ighv1-53A0A075B5W3 117 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 P01748 117 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Egr2P08152 470 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Fam19a4Q7TPG5 135 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 E030018B13RikJ3QMS9 113 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav4d-3A0A075B625 110 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Iglc1A0A0G2JE99 106 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 P01843 105 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Crip1P63254 77 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Cdpf1Q8R3A2 119 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Prrc2cQ3TLH4 2846 aaKnown RBP5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav13d-1A0A075B606 110 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 P01745 121 aa5.18□□□□□ -1.58
Scn8a-205ENSMUST00000108910 1810032O08RikE9PZV8 113 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 NpyP57774 97 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Kiaa1549Q68FD9 1940 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm17472A0A075B683 117 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 P04943 107 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 P04944 107 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm10295Q8CCF3 114 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav7-6A0A075B640 112 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gata3P23772 443 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 7420426K07RikQ3UX66 186 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 IgipA0A1B0GR74 53 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 9130230L23RikQ8CC80 163 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ociad2Q9D8W7 154 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav13-2A0A075B649 110 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trbv16A0A0B4J1H3 115 aa5.17□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Ighv12-3A0A075B5T1 117 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Igkv8-18A0A0B4J1J3 123 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Camk2n2Q78WH7 79 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Spink8Q09TK9 105 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Igkv1-88A0A140T8N1 120 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 AngP21570 145 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Cox7b2Q9D2H1 82 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Gm42674D3YUT9 64 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 SvipQ3UZP4 77 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Col24a1Q30D77 1733 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav13-4-dv7A0A075B6C2 110 aa5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Nsun4C4P6S0 806 aaKnown RBP5.16□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Tns1E9Q0S6 1888 aaKnown RBP5.15□□□□□ -1.58
Scn8a-205ENSMUST00000108910 1700012A03RikQ9DAF1 130 aa5.15□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Map1aQ9QYR6 2776 aa5.15□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Klk12B2RVZ0 247 aa5.15□□□□□ -1.58
Scn8a-205ENSMUST00000108910 A230072I06RikQ3UUJ8 172 aa5.15□□□□□ -1.58
Scn8a-205ENSMUST00000108910 9430069I07RikQ9CX21 111 aa5.15□□□□□ -1.58
Scn8a-205ENSMUST00000108910 Trav13-1A0A075B644 110 aa5.15□□□□□ -1.59
Scn8a-205ENSMUST00000108910 Igkv3-5A0A140T8M6 119 aa5.15□□□□□ -1.59
Scn8a-205ENSMUST00000108910 Ebi3O35228 228 aa5.15□□□□□ -1.59
Scn8a-205ENSMUST00000108910 CrygdP04342 174 aa5.15□□□□□ -1.59
Scn8a-205ENSMUST00000108910 Fgf6P21658 208 aa5.15□□□□□ -1.59
Scn8a-205ENSMUST00000108910 Klk5Q9D140 293 aa5.15□□□□□ -1.59
Scn8a-205ENSMUST00000108910 Adamts20P59511 1906 aa5.15□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms