RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tm2d3Q8BJ83 261 aa6.35□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Wfdc21Q8BTE6 63 aa6.35□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Phlda3Q9WV95 125 aa6.35□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Ighv5-4A0A075B5P9 117 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Ighv14-1A0A075B5R4 117 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Ighv8-13A0A075B5Y0 101 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Trbv13-2A0A140T8N6 113 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Zfp41Q02526 198 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Sdk1Q3UH53 2193 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Adgrg4B7ZCC9 3073 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Arhgef17Q80U35 2057 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Brd3osA0A1B0GRB6 84 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Tcte2E9PY37 120 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 OtoglF7A4A7 2325 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Igf1P05017 153 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Trav6-2Q5R1I4 113 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Lhfpl6Q8BM86 200 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Q8VCE4 163 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Hspb3Q9QZ57 154 aa6.34□□□□□ -1.39
Upf3b-201ENSMUST00000076265 Igkv19-93A0A0G2JFZ3 115 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Zfp712E9PXJ4 705 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Olfr204E9Q8M0 305 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Gm10324L7N208 604 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Zfp2P08043 459 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Gm9922Q8C3P1 144 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Acyp2P56375 106 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Trappc1Q5NCF2 145 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 RfesdQ8K2P6 157 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Dynlrb2Q9DAJ5 96 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Gm12728V9GX31 77 aa6.33□□□□□ -1.4
Upf3b-201ENSMUST00000076265 C2cd3Q52KB6 2323 aa6.32□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Unc79Q0KK59 2596 aa6.32□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Myo18bE9PV66 2605 aa6.32□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Trav4d-3A0A075B625 110 aa6.32□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Igkv4-81A0A0G2JEY5 119 aa6.32□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Defa14P50712 85 aa6.32□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Il9P15247 144 aa6.32□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Tmem141A2AJB2 108 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 CnbpP53996 178 aaKnown RBP6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 NrepQ07475 68 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Krtap3-2Q9D638 99 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Krtap3-3Q9D7P0 99 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 RttnQ8R4Y8 2226 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Sptbn1Q62261 2363 aaKnown RBP6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 LystP97412 3788 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Frem1Q684R7 2191 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Trav19A0A0B4J1K4 119 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Fam53aE9PV82 402 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 P01755 137 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 RprmlQ3URD2 117 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Fam229bQ8CF36 80 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Crip2Q9DCT8 208 aaKnown RBP6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Pla2g2eQ9QUL3 142 aa6.31□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Odf1Q61999 247 aa6.3□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Fam19a2Q7TPG7 131 aa6.3□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Tmed6Q9CQG0 239 aa6.3□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Q9DAA7 145 aa6.3□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Ighv3-1A0A075B5S6 116 aa6.3□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Ighv3-8A0A075B5T0 131 aa6.3□□□□□ -1.4
Upf3b-201ENSMUST00000076265 9330161L09RikQ9D253 136 aa6.3□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Akap6E9Q9K8 2307 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Ttc28Q80XJ3 2450 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Ighv1-50A0A075B5W1 117 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Gm21983D6RFS9 131 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Gm17728E9Q5K2 132 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Rnase2O35291 155 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Upk2P38575 184 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Defa8P50706 81 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Supt4h1aP63271 117 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Prss29Q99MS4 279 aa6.29□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Tnp2P11378 117 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Tmem170bP86050 132 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Ndufa12Q7TMF3 145 aaKnown RBP6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Zfp958Q99LG7 467 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Fgf23Q9EPC2 251 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Dopey1Q8BL99 2399 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Gm10770F7D043 238 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 LeprotO89013 131 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 AmelxP63277 210 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 E130116L18RikQ8BMV6 101 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Klk15Q8CGR4 254 aa6.28□□□□□ -1.4
Upf3b-201ENSMUST00000076265 Ighv7-4A0A0A6YXL5 121 aa6.27□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Gm21060J3KMU4 56 aa6.27□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Rnase1P00683 149 aa6.27□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Ormdl3Q9CPZ6 153 aa6.27□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Fam103a1Q9CQY2 119 aaKnown RBP6.27□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Trav1A0A075B5Z4 110 aa6.27□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Usp9xP70398 2559 aaKnown RBP6.27□□□□□ -1.41
Upf3b-201ENSMUST00000076265 DysfQ9ESD7 2090 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 EtdQ80SW5 59 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Lypd6Q8BPP5 171 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Lypd4Q8BVP6 246 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 AI606181Q8C7B9 129 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Tmem123Q91Z22 195 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Igkv9-124A0A0G2JDR3 117 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Ighv1-69A0A0G2JFS5 117 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Krtap11-1E9Q2E9 183 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Zfp707F6QUN2 391 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Saa1P05366 122 aa6.26□□□□□ -1.41
Upf3b-201ENSMUST00000076265 Gsc2P56916 198 aa6.26□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms