Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Gm25239-201ENSMUST00000174915 86 ntBASIC27.73■■■□□ 2.03
Gm12728V9GX31 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Gm12728V9GX31 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Gm12728V9GX31 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Gm12728V9GX31 Psd-208ENSMUST00000224556 2034 ntBASIC25.63■■□□□ 1.69
Gm12728V9GX31 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Gm12728V9GX31 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm12728V9GX31 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Gm12728V9GX31 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Gm12728V9GX31 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Gm12728V9GX31 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Gm12728V9GX31 Gm15042-201ENSMUST00000120212 883 ntBASIC24.85■■□□□ 1.57
Gm12728V9GX31 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Gm12728V9GX31 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Gm12728V9GX31 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Gm12728V9GX31 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.52■■□□□ 1.52
Gm12728V9GX31 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm12728V9GX31 Gm15045-201ENSMUST00000117359 883 ntBASIC24.41■■□□□ 1.5
Gm12728V9GX31 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Gm12728V9GX31 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Gm12728V9GX31 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm12728V9GX31 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm12728V9GX31 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm12728V9GX31 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm12728V9GX31 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Gm12728V9GX31 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Gm12728V9GX31 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Gm12728V9GX31 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Gm12728V9GX31 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Gm12728V9GX31 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.73■■□□□ 1.39
Gm12728V9GX31 Gm24109-201ENSMUST00000175489 103 ntBASIC23.72■■□□□ 1.39
Gm12728V9GX31 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Gm12728V9GX31 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Gm12728V9GX31 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.61■■□□□ 1.37
Gm12728V9GX31 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Gm12728V9GX31 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm12728V9GX31 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm12728V9GX31 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.43■■□□□ 1.34
Gm12728V9GX31 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm12728V9GX31 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm12728V9GX31 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.25■■□□□ 1.31
Gm12728V9GX31 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm12728V9GX31 Gm23366-201ENSMUST00000175022 89 ntBASIC23.23■■□□□ 1.31
Gm12728V9GX31 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm12728V9GX31 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.17■■□□□ 1.3
Gm12728V9GX31 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.11■■□□□ 1.29
Gm12728V9GX31 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gm12728V9GX31 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Gm12728V9GX31 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm12728V9GX31 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Gm12728V9GX31 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm12728V9GX31 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.88■■□□□ 1.25
Gm12728V9GX31 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Gm12728V9GX31 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Gm12728V9GX31 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Gm12728V9GX31 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.75■■□□□ 1.23
Gm12728V9GX31 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm12728V9GX31 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm12728V9GX31 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Gm12728V9GX31 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm12728V9GX31 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.65■■□□□ 1.22
Gm12728V9GX31 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm12728V9GX31 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Gm12728V9GX31 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Gm12728V9GX31 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm12728V9GX31 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Gm12728V9GX31 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm12728V9GX31 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm12728V9GX31 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm12728V9GX31 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm12728V9GX31 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm12728V9GX31 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Gm12728V9GX31 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm12728V9GX31 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Gm12728V9GX31 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Gm12728V9GX31 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm12728V9GX31 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm12728V9GX31 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm12728V9GX31 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm12728V9GX31 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Gm12728V9GX31 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm12728V9GX31 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Gm12728V9GX31 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.07■■□□□ 1.12
Gm12728V9GX31 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Gm12728V9GX31 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm12728V9GX31 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm12728V9GX31 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm12728V9GX31 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm12728V9GX31 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm12728V9GX31 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm12728V9GX31 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.93■■□□□ 1.1
Gm12728V9GX31 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm12728V9GX31 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Gm12728V9GX31 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm12728V9GX31 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm12728V9GX31 Gm27325-201ENSMUST00000175467 74 ntBASIC21.88■■□□□ 1.09
Gm12728V9GX31 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm12728V9GX31 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm12728V9GX31 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm12728V9GX31 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms