RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Sdk1Q3UH53 2193 aa12.66□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 P84751 237 aa12.66□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Odf3Q920N1 254 aa12.66□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Rnase1P00683 149 aa12.65□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Eml6Q5SQM0 1958 aa12.65□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Sprr3O09116 238 aa12.65□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Ttc28Q80XJ3 2450 aa12.65□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 4930546C10RikE9Q4Y3 121 aa12.65□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Tm2d2Q8R0I4 213 aa12.65□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 Notch2O35516 2470 aa12.65□□□□□ -0.38
Ubfd1-201ENSMUST00000033158 P01659 112 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 P01745 121 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 P01820 115 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Dkk4Q8VEJ3 221 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 E130116L18RikQ8BMV6 101 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Notch4P31695 1964 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Trav13n-1A0A0G2JEU8 110 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Mrpl35Q9CQL6 188 aa12.64□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Gm14137Q8CE97 175 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 P06328 117 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Ube2bP63147 152 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Q9D131 166 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Rbmy1bQ60990 380 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Gm10295Q8CCF3 114 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Igkv1-122A0A140T8M9 119 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Gm42674D3YUT9 64 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Sigmar1O55242 223 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Wdr90Q6ZPG2 1874 aa12.63□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Abca2P41234 2434 aa12.62□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 AW146154Q3TPQ7 468 aa12.62□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Cdpf1Q8R3A2 119 aa12.62□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Trav13d-1A0A075B606 110 aa12.62□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Trav4-3A0A0B4J1K1 110 aa12.62□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Gm10518F6UQQ9 182 aa12.62□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Dscaml1Q4VA61 2053 aa12.61□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 4930470P17RikQ9D542 155 aa12.61□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Arid1bE9Q4N7 2244 aa12.61□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 P0C913 63 aa12.61□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Sptbn4E9PX29 2561 aa12.61□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Trav13d-4A0A0G2JFX3 110 aa12.6□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Ighv1-82A0A0G2JEU7 117 aa12.6□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Lce6aD3YV94 81 aa12.6□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Snai3Q9QY31 287 aa12.6□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Ighv2-6A0A075B6A7 116 aa12.6□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Ighv1-11A0A0A6YWI9 117 aa12.6□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 DysfQ9ESD7 2090 aa12.6□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Ucn2Q99ML8 113 aa12.59□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Pla2g2dQ9WVF6 144 aa12.59□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Plxnb3Q9QY40 1902 aa12.59□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 ColqO35348 457 aa12.59□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Cox11Q6P8I6 275 aa12.59□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Lrrk2Q5S006 2527 aa12.58□□□□□ -0.39
Ubfd1-201ENSMUST00000033158 Igkv4-58A0A0G2JGI6 119 aa12.58□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Igkv4-74A0A0B4J1I3 119 aa12.58□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Ociad2Q9D8W7 154 aa12.58□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Trav13-2A0A075B649 110 aa12.58□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Hivep3A2A884 2348 aa12.58□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Gphb5Q812B2 130 aa12.57□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Tmem223Q9CQE2 199 aaKnown RBP12.57□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 9430069I07RikQ9CX21 111 aa12.57□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 MifP34884 115 aaKnown RBP12.56□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Mrpl55Q9CZ83 127 aa12.56□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Ighv1-75A0A075B5Y2 117 aa12.56□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Gm10542F6XDR3 90 aa12.56□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Znf239P24399 201 aa12.56□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Camk2n2Q78WH7 79 aa12.56□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 1700010B08RikQ9DAI7 102 aa12.56□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Trav7-6A0A075B640 112 aa12.55□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Piezo2Q8CD54 2822 aa12.55□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Igkv8-26A0A075B5N5 123 aa12.55□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Tcte2E9PY37 120 aa12.55□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Spink10Q8CAC8 162 aa12.55□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Cox7b2Q9D2H1 82 aa12.55□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Fer1l4A3KGK3 1992 aa12.55□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Gm9925F6T2U3 160 aa12.54□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Klk5Q9D140 293 aa12.54□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Tax1bp3Q9DBG9 124 aa12.54□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Tnfrsf23Q9ER63 176 aa12.54□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Tmem243B2RVB9 118 aa12.54□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Foxc1Q61572 553 aa12.54□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Higd2aQ9CQJ1 106 aa12.54□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 AcanQ61282 2132 aaKnown RBP12.53□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 P01747 120 aa12.53□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Prrc2aQ7TSC1 2158 aaKnown RBP12.53□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 DscamQ9ERC8 2013 aa12.53□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Trav13-4-dv7A0A075B6C2 110 aa12.53□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 Gm26602M0QWA4 95 aa12.53□□□□□ -0.4
Ubfd1-201ENSMUST00000033158 C2cd3Q52KB6 2323 aa12.52□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Pla2g2cP48076 150 aa12.52□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 AgrnA2ASQ1 1950 aa12.52□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Ighv2-3A0A075B696 115 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Fxyd5P97808 178 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Gm17472A0A075B683 117 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Reg3bP35230 175 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Trav13-1A0A075B644 110 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Igkv1-88A0A140T8N1 120 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 GhrhP16043 103 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Wisp2Q9Z0G4 251 aa12.51□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Acyp1P56376 99 aa12.5□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Gm6899Q3USS0 134 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 126 ms