RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Chchd5Q9CQP3 110 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Helz2E9QAM5 2947 aaKnown RBP5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ighv8-12A0A0G2JDE1 119 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ighv1-69A0A0G2JFS5 117 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 CckP09240 115 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Myod1P10085 318 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gsx1P31315 261 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Cfc1P97766 202 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Tmem213Q08EA8 116 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Cysltr1Q99JA4 352 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Sumo2P61957 95 aaKnown RBP5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm5105Q8C6Y9 112 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm26566Q8CAC1 153 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Lgals4Q8K419 326 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Prrc2aQ7TSC1 2158 aaKnown RBP5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 CrygbP04344 175 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Srp14P16254 110 aaKnown RBP5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Lmo4P61969 165 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm1968Q3T9I3 115 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Sox16Q62247 57 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 NpbQ8K4P1 119 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Q9D131 166 aa5.81□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Trav21-dv12A0A075B6C4 109 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm6793B2RXM2 351 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 MalO09198 153 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 P01801 115 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 P01802 115 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm10295Q8CCF3 114 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Rpl32-psP17932 135 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 BC048562Q80ZQ7 204 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Mrpl36Q99N90 102 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 LystP97412 3788 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 PkigO70139 76 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Spint3Q3UW09 88 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Trav7d-3Q5R1I1 112 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Rasl10aQ8K5A4 203 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Pygo1Q9D0P5 417 aa5.8□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm35549A0A0N4SUS7 141 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gp9O88186 177 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 P04219 140 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 NdpP48744 131 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Fam222aQ6PGH4 453 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm9913Q8BQQ2 135 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Fam216bQ8CC14 138 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gkn1Q9CR36 201 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 P01837 106 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Cela2aP05208 271 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Prok1Q14A28 105 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Smr3aQ61900 147 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 P06330 118 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Defa1P11477 93 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm4763Q8CFJ5 196 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Hivep3A2A884 2348 aa5.79□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Rnase2aQ8K196 155 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ighv1-55A0A075B5W6 117 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ovol3D3YYM0 189 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Tmem262D3Z338 116 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Pdzd2E9Q1M1 2796 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ins2P01326 110 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Defa2P28309 93 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ndufa4l2Q4FZG9 87 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Tmem14cQ9CQN6 114 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Iah1Q9DB29 249 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ighv5-6A0A075B5Q0 117 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Smim1P0C8K7 78 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ccl6P27784 116 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Sdhaf1Q3U276 118 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ube2wQ8VDW4 151 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Rnf185Q91YT2 192 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Prr13Q9CQJ5 137 aa5.78□□□□□ -1.48
Bdnf-203ENSMUST00000111043 AtrQ9JKK8 2635 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Olfr311Q5NC59 308 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Cyyr1Q8VIH7 165 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Snai3Q9QY31 287 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Gm5089A1L3C8 106 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Znf239P24399 201 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Lrcol1Q3URS3 161 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Olfr313Q5NC55 308 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Zfp248Q640N4 576 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 CnfnQ6PCW6 111 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Atp5eP56382 52 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Higd1aQ9JLR9 95 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 GlrxQ9QUH0 107 aa5.77□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Brwd1Q921C3 2304 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Ighv8-5A0A0A6YY60 119 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 P01812 117 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Defb2P82020 71 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Gm9958Q8C9U4 106 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Tmem101Q91VP7 257 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Ccl24Q9JKC0 119 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Obox8V9GWY9 217 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Gm44965A0A0N4SVR3 59 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 E030018B13RikJ3QMS9 113 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 TtrP07309 147 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Trav3-4A0A075B654 114 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Ighv1-77A0A0G2JGS9 117 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Vwc2lQ505H4 222 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Ifi27l2aQ8R412 90 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 AY761184Q9D848 116 aa5.76□□□□□ -1.49
Bdnf-203ENSMUST00000111043 Gm29423A0A087WRM1 55 aa5.75□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms