RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Brwd3A2AHJ4 1799 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm4744D3Z3S5 154 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Igkv15-103A0A140T8P3 115 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Atp23Q9CWQ3 201 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ly75Q60767 1723 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 4930535I16RikQ9CUI2 172 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv1-62-1A0A075B5U3 116 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Igkv10-95A0A0G2JFY3 115 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gata4Q08369 441 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Tet2Q4JK59 1912 aaKnown RBP4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ube2d4D3YUH6 135 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 P01660 111 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Svs5P30933 122 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Tmem210Q9D2F0 147 aa4.82□□□□□ -1.64
Vcan-203ENSMUST00000109546 Igkv2-137A0A0B4J1H6 120 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ube2d1P61080 147 aaKnown RBP4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Zc2hc1bQ9D534 172 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Tmem263Q9DAM7 115 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv1-31A0A0A6YWK5 117 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 ColqO35348 457 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 P04219 140 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Defb13Q8R2I4 64 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 E030025P04RikA2A6V5 185 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Flg2Q2VIS4 2362 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ppp1r32Q148A4 427 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Csdc2Q91YQ3 154 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Wdr38Q9D994 303 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 C920008G01RikA0A0B4J1N1 112 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Rpl35aO55142 110 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Apoc4Q61268 124 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Igkv4-92A0A0B4J1I2 117 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Mlst8Q9DCJ1 326 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Dennd4cA6H8H2 1906 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Tcf20Q9EPQ8 1987 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Plxna4Q80UG2 1893 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm17521F6QAC8 156 aa4.81□□□□□ -1.64
Vcan-203ENSMUST00000109546 P01794 123 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Lrcol1Q3URS3 161 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm5941Q497P9 117 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Fam19a5Q91WE9 132 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Camk2n2Q78WH7 79 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Shank3Q4ACU6 1730 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 P0C913 63 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv1-5A0A0A6YWG2 117 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ube2e1P52482 193 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv1-55A0A075B5W6 117 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 KprpB2RUR4 657 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv8-12A0A0G2JDE1 119 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Pcdh15Q99PJ1 1943 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Tcl1b5P56845 121 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Odf3l1Q810P2 275 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Znf706Q9D115 76 aaKnown RBP4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ly6gP35461 111 aa4.8□□□□□ -1.64
Vcan-203ENSMUST00000109546 A0A286YE49 62 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 SprnQ8BWU1 147 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm20730A0A075B5J6 119 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm15217A2CG07 155 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 P01793 123 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Lmo1Q924W9 156 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Rpl39lQ9CQD0 51 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 CtrlQ9ER05 264 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 2410004P03RikA0A087WQY2 205 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv8-5A0A0A6YY60 119 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Lyg1Q9D7Q0 197 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 MlanaQ2TA50 113 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Defb33Q30KN3 62 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Cysrt1Q9D1E4 142 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ube2d3P61079 147 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm10643Q3URG9 111 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Igkv2-109A0A075B5K6 120 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Odf1Q61999 247 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Fam110aQ8R184 296 aa4.79□□□□□ -1.64
Vcan-203ENSMUST00000109546 Rps28P62858 69 aaKnown RBP4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Loxl1P97873 607 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Nav2E9Q842 2432 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Wbp1P97764 304 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv1-64A0A075B5X3 117 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 A830005F24RikQ8BRT5 167 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Adamts9E9PUN6 1931 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 P01655 112 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Cox7bP56393 80 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm12253Q5NC48 229 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Gm9961Q8BNV2 113 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv1-11A0A0A6YWI9 117 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Ighv1-50A0A075B5W1 117 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 1700012A03RikQ9DAF1 130 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Smim10l1A0A087WNQ7 89 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 Nxph4G3X9N5 304 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 1110002E22RikE0CYV9 1786 aa4.78□□□□□ -1.64
Vcan-203ENSMUST00000109546 SisF8VQM5 1818 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ighv2-6-8A0A0A6YWY9 116 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Klk12B2RVZ0 247 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Igkv6-32A0A140T8N9 115 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Cfap126Q6P8X9 189 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Ncor1Q60974 2453 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 P18528 98 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Gm17577J3QNF7 156 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Limd2Q8BGB5 128 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Lypd6Q8BPP5 171 aa4.77□□□□□ -1.65
Vcan-203ENSMUST00000109546 Igkv12-89A0A0G2JGW8 112 aa4.77□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 1731 ms