RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Arid1bE9Q4N7 2244 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv5-8A0A075B676 92 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Pde6gP09174 87 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 MsmpB1AWI6 139 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Igf1P05017 153 aa7.84□□□□□ -1.16
Ubr1-201ENSMUST00000028728 BtcQ05928 177 aa7.84□□□□□ -1.16
Ubr1-201ENSMUST00000028728 9230109A22RikQ8BHE6 111 aa7.84□□□□□ -1.16
Ubr1-201ENSMUST00000028728 9430069I07RikQ9CX21 111 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Vpreb2P13373 142 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Ighv1-53A0A075B5W3 117 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Igkv4-54A0A0G2JES9 117 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Spry4Q9WTP2 300 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Prr12E9PYL2 2035 aaKnown RBP7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Rpl39P62892 51 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Odf1Q61999 247 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Ormdl1Q921I0 153 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Q9D131 166 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm9513B3GLJ6 99 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Cfap126Q6P8X9 189 aa7.83□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm44965A0A0N4SVR3 59 aa7.82□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Dand5Q76LW6 185 aa7.82□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Triap1Q9D8Z2 76 aa7.82□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Ighv1-12A0A0A6YXJ9 117 aa7.82□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm9970F6ZED4 185 aa7.82□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Igkv4-72A0A0B4J1I4 117 aa7.82□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm20481G3UXK4 153 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Nbl1Q61477 178 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Q9DAQ5 155 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Rpl35aO55142 110 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 P01753 117 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Cela2aP05208 271 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gata3P23772 443 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Fxyd5P97808 178 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 AW146154Q3TPQ7 468 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm15097E9QA14 449 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Ighv1-11A0A0A6YWI9 117 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Reg3gO09049 174 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Eif4ebp1Q60876 117 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Sox16Q62247 57 aa7.81□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gata1P17679 413 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Odf3l1Q810P2 275 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Q99M08 65 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Igkv4-57A0A0A6YYE7 117 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 MifP34884 115 aaKnown RBP7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Col5a3Q9JLI2 1739 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Ighv1-61P01749 117 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Znf672Q99LH4 468 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Luzp4B1AV09 449 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm15127B1AVZ5 449 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm15107B1B0X0 449 aa7.8□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Smim10l1A0A087WNQ7 89 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm15091B1AZM2 449 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gm15128A2ADW8 449 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 CstadQ9D245 104 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Vpreb1P13372 142 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Timm17bQ9Z0V7 172 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Ighv1-75A0A075B5Y2 117 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Igkv4-69A0A0B4J1I6 116 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Notch3Q61982 2318 aa7.79□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Gvin1Q80SU7 2427 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Tmem52Q9D702 196 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Wdr38Q9D994 303 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Pcdh15Q99PJ1 1943 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Sec16aA2AIX1 2377 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Spag11Q8K4N2 71 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 GfyJ3KML8 504 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Lyrm9Q3UN90 78 aa7.78□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Trbv13-1A0A0B4J1P8 112 aa7.77□□□□□ -1.16
Ubr1-201ENSMUST00000028728 Ly6g6dQ9Z1Q3 135 aa7.77□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm17324Q8C6J8 137 aa7.77□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Znf239P24399 201 aa7.77□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Dph3Q8K0W9 82 aa7.77□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Igkv4-79A0A075B5L8 119 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Igkv3-2A0A075B5P0 119 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Igkv4-78A0A0A6YYE5 119 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Nup210Q9QY81 1886 aaKnown RBP7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 BikO70337 150 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm9958Q8C9U4 106 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Smim1P0C8K7 78 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Crlf1Q9JM58 425 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Pglyrp1O88593 182 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm5629P06327 117 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm9949Q8C9F4 104 aa7.76□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Ang3P97802 145 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 CnfnQ6PCW6 111 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Col6a4A2AX52 2309 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Dad1P61804 113 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Plxnb1Q8CJH3 2119 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm1968Q3T9I3 115 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Smr3aQ61900 147 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Leap2Q91V13 76 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Rnf185Q91YT2 192 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Chchd5Q9CQP3 110 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Sp5Q9JHX2 398 aa7.75□□□□□ -1.17
Ubr1-201ENSMUST00000028728 OdaphJ3QNT8 126 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 CenpwQ3URR0 86 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Ighv1-58A0A075B5W9 117 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Gm12057A0A087WR21 115 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Igkv4-58A0A0G2JGI6 119 aa7.74□□□□□ -1.17
Ubr1-201ENSMUST00000028728 Tmem223Q9CQE2 199 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 113.8 ms