RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Fam222aQ6PGH4 453 aa16.72■□□□□ 0.27
Sox1-201ENSMUST00000180353 Gm20708H3BKF4 155 aa16.72■□□□□ 0.27
Sox1-201ENSMUST00000180353 Pcnx3Q8VI59 2028 aa16.72■□□□□ 0.27
Sox1-201ENSMUST00000180353 Tpsg1Q9QUL7 311 aa16.72■□□□□ 0.27
Sox1-201ENSMUST00000180353 Gp9O88186 177 aa16.71■□□□□ 0.27
Sox1-201ENSMUST00000180353 Smrp1Q2MH31 260 aa16.71■□□□□ 0.27
Sox1-201ENSMUST00000180353 P06330 118 aa16.71■□□□□ 0.27
Sox1-201ENSMUST00000180353 Sp5Q9JHX2 398 aa16.71■□□□□ 0.27
Sox1-201ENSMUST00000180353 Ighv8-5A0A0A6YY60 119 aa16.71■□□□□ 0.27
Sox1-201ENSMUST00000180353 P01723 117 aa16.71■□□□□ 0.27
Sox1-201ENSMUST00000180353 A730015C16RikQ8C992 119 aa16.71■□□□□ 0.26
Sox1-201ENSMUST00000180353 Lamtor3O88653 124 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Fam24aQ8CF27 98 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Triap1Q9D8Z2 76 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Cxcl14Q9WUQ5 99 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Igkv6-15A0A140T8M5 115 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Hoxd3P09027 433 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Ifitm1Q9D103 106 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Ighv1-77A0A0G2JGS9 117 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 SelenowP63300 88 aa16.7■□□□□ 0.26
Sox1-201ENSMUST00000180353 Nup210Q9QY81 1886 aaKnown RBP16.69■□□□□ 0.26
Sox1-201ENSMUST00000180353 Mpv17l2Q8VIK2 200 aa16.69■□□□□ 0.26
Sox1-201ENSMUST00000180353 Spink12Q9D256 87 aa16.68■□□□□ 0.26
Sox1-201ENSMUST00000180353 Lypd8Q9D7S0 255 aa16.68■□□□□ 0.26
Sox1-201ENSMUST00000180353 Trav6-4A0A075B6B4 115 aa16.68■□□□□ 0.26
Sox1-201ENSMUST00000180353 3110021N24RikJ3QMN2 152 aa16.68■□□□□ 0.26
Sox1-201ENSMUST00000180353 Rpl36aP83882 106 aaKnown RBP16.68■□□□□ 0.26
Sox1-201ENSMUST00000180353 Gm20730A0A075B5J6 119 aa16.68■□□□□ 0.26
Sox1-201ENSMUST00000180353 CenpeQ6RT24 2474 aaKnown RBP16.68■□□□□ 0.26
Sox1-201ENSMUST00000180353 Pfn2Q9JJV2 140 aa16.67■□□□□ 0.26
Sox1-201ENSMUST00000180353 Spry4Q9WTP2 300 aa16.67■□□□□ 0.26
Sox1-201ENSMUST00000180353 Timm17aQ9Z0V8 171 aa16.67■□□□□ 0.26
Sox1-201ENSMUST00000180353 Nckap5E9QAE1 1909 aa16.67■□□□□ 0.26
Sox1-201ENSMUST00000180353 Snai3Q9QY31 287 aa16.67■□□□□ 0.26
Sox1-201ENSMUST00000180353 Igkv4-62A0A0G2JDW9 117 aa16.67■□□□□ 0.26
Sox1-201ENSMUST00000180353 Trbv30A0A0B4J1P1 111 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Pou2af1Q64693 256 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 3110018I06RikQ9CXS0 120 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Ly6g6dQ9Z1Q3 135 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Plxnb1Q8CJH3 2119 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Gm15091B1AZM2 449 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Ccl19O70460 108 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Ndufa11Q9D8B4 141 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 PspnO70300 156 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Ang2Q64438 145 aa16.66■□□□□ 0.26
Sox1-201ENSMUST00000180353 Svs5P30933 122 aa16.65■□□□□ 0.26
Sox1-201ENSMUST00000180353 Defb29Q8BGW9 78 aa16.65■□□□□ 0.26
Sox1-201ENSMUST00000180353 Ndufb4Q9CQC7 129 aa16.65■□□□□ 0.26
Sox1-201ENSMUST00000180353 Chchd5Q9CQP3 110 aa16.65■□□□□ 0.26
Sox1-201ENSMUST00000180353 Sdk2Q6V4S5 2176 aa16.65■□□□□ 0.26
Sox1-201ENSMUST00000180353 Gm2564F6Z9S8 108 aa16.65■□□□□ 0.26
Sox1-201ENSMUST00000180353 Egr1P08046 533 aa16.65■□□□□ 0.26
Sox1-201ENSMUST00000180353 Prpf8Q99PV0 2335 aaKnown RBP16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Ighv1-31A0A0A6YWK5 117 aa16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Vpreb1P13372 142 aa16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Prok1Q14A28 105 aa16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Inafm2A0A1L1STD6 152 aa16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Gm20499D3Z4G5 72 aa16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Sfta2E9PXB6 77 aa16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Gm17324Q8C6J8 137 aa16.64■□□□□ 0.25
Sox1-201ENSMUST00000180353 Gm5941Q497P9 117 aa16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 SonQ9QX47 2444 aaKnown RBP16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 Ndufa12Q7TMF3 145 aaKnown RBP16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 Atp6v0e1Q9CQD8 81 aa16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 Ncor2Q9WU42 2472 aaKnown RBP16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 ArtnQ9Z0L2 224 aa16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 Cdk2ap2Q9CPY4 127 aa16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 Mrpl35Q9CQL6 188 aa16.63■□□□□ 0.25
Sox1-201ENSMUST00000180353 AngP21570 145 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Klk5Q9D140 293 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Srsf2Q62093 221 aaKnown RBP16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Fam216bQ8CC14 138 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Lst1O08843 95 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Rpl39P62892 51 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 PemtQ61907 199 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Crip3Q6Q6R3 243 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Fhl4Q8CDC8 279 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Egr2P08152 470 aa16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 MifP34884 115 aaKnown RBP16.62■□□□□ 0.25
Sox1-201ENSMUST00000180353 Pcnx2Q5DU28 2122 aa16.61■□□□□ 0.25
Sox1-201ENSMUST00000180353 Ube2e1P52482 193 aa16.61■□□□□ 0.25
Sox1-201ENSMUST00000180353 Defb33Q30KN3 62 aa16.61■□□□□ 0.25
Sox1-201ENSMUST00000180353 Defb30Q30KN4 75 aa16.61■□□□□ 0.25
Sox1-201ENSMUST00000180353 Trav4-3A0A0B4J1K1 110 aa16.61■□□□□ 0.25
Sox1-201ENSMUST00000180353 Spink8Q09TK9 105 aa16.61■□□□□ 0.25
Sox1-201ENSMUST00000180353 Smim1P0C8K7 78 aa16.61■□□□□ 0.25
Sox1-201ENSMUST00000180353 P04944 107 aa16.6■□□□□ 0.25
Sox1-201ENSMUST00000180353 CenpwQ3URR0 86 aa16.6■□□□□ 0.25
Sox1-201ENSMUST00000180353 Minos1Q7TNS2 76 aa16.6■□□□□ 0.25
Sox1-201ENSMUST00000180353 Ndufa4l2Q4FZG9 87 aa16.59■□□□□ 0.25
Sox1-201ENSMUST00000180353 Stpg1Q9D2F5 341 aa16.59■□□□□ 0.25
Sox1-201ENSMUST00000180353 Gm9513B3GLJ6 99 aa16.58■□□□□ 0.25
Sox1-201ENSMUST00000180353 Odf3l1Q810P2 275 aa16.58■□□□□ 0.25
Sox1-201ENSMUST00000180353 Fancd2osQ9D4K4 178 aa16.58■□□□□ 0.24
Sox1-201ENSMUST00000180353 Edn2P22389 175 aa16.58■□□□□ 0.24
Sox1-201ENSMUST00000180353 9430069I07RikQ9CX21 111 aa16.58■□□□□ 0.24
Sox1-201ENSMUST00000180353 Ighv1-49A0A0A6YWX2 117 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 Trbv13-1A0A0B4J1P8 112 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 Trav9d-4A0A0G2JG37 103 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tmem254aP0DN89 123 aa16.57■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 98.4 ms