RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 P01786 117 aa12.71□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Rpl32P62911 135 aaKnown RBP12.71□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Plscr4P58196 326 aa12.71□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Sslp1Q3UN54 99 aa12.71□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Ociad2Q9D8W7 154 aa12.71□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Arhgef17Q80U35 2057 aa12.71□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Q8R092 253 aa12.7□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Tpsg1Q9QUL7 311 aa12.7□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 BC067074F6RXI4 2391 aa12.7□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Lage3Q9CR70 148 aa12.7□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Mpv17l2Q8VIK2 200 aa12.7□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Synj2bpQ9D6K5 145 aa12.7□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Gm17359A0A0G2JEB7 487 aa12.69□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Ttc28Q80XJ3 2450 aa12.69□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Gm10192Q3V0S1 108 aa12.69□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Tnrc6aQ3UHK8 1896 aaKnown RBP12.69□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 MyofQ69ZN7 2048 aaKnown RBP12.69□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Gm15128A2ADW8 449 aa12.69□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Reg3gO09049 174 aa12.68□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 MgamB5THE2 1827 aa12.68□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Igkv4-78A0A0A6YYE5 119 aa12.68□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Gm20499D3Z4G5 72 aa12.68□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 SelenowP63300 88 aa12.68□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Fam216bQ8CC14 138 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Ighv1-64A0A075B5X3 117 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Olfr311Q5NC59 308 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 March3Q8BRX9 218 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 UtrnE9Q6R7 3430 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Ighv1-58A0A075B5W9 117 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Smim10l1A0A087WNQ7 89 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Trbv14A0A140T8L9 115 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 PolqQ8CGS6 2544 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Ighv3-4A0A0A6YXF1 117 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 P01756 117 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 P01757 117 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Abca2P41234 2434 aa12.67□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 BC048502Q80Y74 154 aa12.66□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Gm9961Q8BNV2 113 aa12.66□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Igkv4-58A0A0G2JGI6 119 aa12.66□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Foxi2Q3I5G5 311 aa12.66□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Fam110aQ8R184 296 aa12.66□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 C920008G01RikA0A0B4J1N1 112 aa12.66□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Ighv1-74A0A0G2JGK2 117 aa12.66□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Trbv13-1A0A0B4J1P8 112 aa12.65□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Fstl3Q9EQC7 256 aa12.65□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Igkv3-9A0A140T8P4 119 aa12.65□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Edn1P22387 202 aa12.65□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Rai1Q61818 1889 aa12.65□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Fam241bQ9D882 120 aa12.65□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Tax1bp3Q9DBG9 124 aa12.65□□□□□ -0.38
Sptbn4-202ENSMUST00000108362 Iglc1A0A0G2JE99 106 aa12.65□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 P01843 105 aa12.65□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Plxnb3Q9QY40 1902 aa12.64□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 P04940 107 aa12.64□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 P04941 107 aa12.64□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Ang4Q3TMQ6 144 aa12.64□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Tm2d1Q99MB3 208 aa12.64□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Foxc1Q61572 553 aa12.63□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Ighv1-77A0A0G2JGS9 117 aa12.63□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Inafm2A0A1L1STD6 152 aa12.63□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 P01802 115 aa12.63□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Gata1P17679 413 aa12.63□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 P01739 132 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Ighv3-6P18531 116 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Dad1P61804 113 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Lgals4Q8K419 326 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Spry4Q9WTP2 300 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Ighv5-9-1A0A0A6YVS4 126 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Gp9O88186 177 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Prr12E9PYL2 2035 aaKnown RBP12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 BC048562Q80ZQ7 204 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Ifitm1Q9D103 106 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Ighv1-50A0A075B5W1 117 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Fancd2osQ9D4K4 178 aa12.62□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Trav7-6A0A075B640 112 aa12.61□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Mrpl52Q9D0Y8 121 aa12.61□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Glrp1E9Q9S8 174 aa12.61□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Lst1O08843 95 aa12.61□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Tet1Q3URK3 2007 aaKnown RBP12.61□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 NpyP57774 97 aa12.6□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Gm17324Q8C6J8 137 aa12.6□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Gm9970F6ZED4 185 aa12.6□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 9930022D16RikQ8BG27 128 aa12.6□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 P04942 107 aa12.6□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Srsf2Q62093 221 aaKnown RBP12.59□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Trav9d-3A0A075B695 113 aa12.59□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 P01750 117 aa12.59□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Ighv5-8A0A075B676 92 aa12.59□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Igkv8-34A0A0G2JDU0 121 aa12.59□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Tmem210Q9D2F0 147 aa12.59□□□□□ -0.39
Sptbn4-202ENSMUST00000108362 Smim20D3Z7Q2 69 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 Rpl39P62892 51 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 Gm9936Q8C864 160 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 Parp4E9PYK3 1969 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 Col4a6B1AVK5 1691 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 AcanQ61282 2132 aaKnown RBP12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 OdaphJ3QNT8 126 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 Crip1P63254 77 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 Gm10553J3QPF1 123 aa12.58□□□□□ -0.4
Sptbn4-202ENSMUST00000108362 Tmem258P61166 79 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms