RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Cdpf1Q8R3A2 119 aa12.3□□□□□ -0.44
Clcn3-203ENSMUST00000093490 TectaO08523 2155 aa12.3□□□□□ -0.44
Clcn3-203ENSMUST00000093490 CenpeQ6RT24 2474 aaKnown RBP12.3□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Plscr4P58196 326 aa12.3□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Ramp1Q9WTJ5 148 aa12.29□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Runx1Q03347 451 aa12.29□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Dkk4Q8VEJ3 221 aa12.29□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Crlf1Q9JM58 425 aa12.29□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Hoxb4P10284 250 aa12.29□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Tmem263Q9DAM7 115 aa12.29□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Defa27F2Z403 93 aa12.29□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Col5a3Q9JLI2 1739 aa12.28□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Pfn2Q9JJV2 140 aa12.28□□□□□ -0.44
Clcn3-203ENSMUST00000093490 GhrhP16043 103 aa12.28□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Map6d1Q14BB9 191 aa12.28□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Mrps12O35680 139 aa12.28□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Igkv2-137A0A0B4J1H6 120 aa12.27□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Trav14d-3-dv8A0A075B619 120 aa12.27□□□□□ -0.44
Clcn3-203ENSMUST00000093490 Pcnx1Q9QYC1 2344 aa12.27□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Dock10Q8BZN6 2150 aa12.27□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Trbv14A0A140T8L9 115 aa12.27□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Trav4d-3A0A075B625 110 aa12.26□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Igkv4-61A0A0G2JH00 117 aa12.26□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Gp9O88186 177 aa12.26□□□□□ -0.45
Clcn3-203ENSMUST00000093490 4930415O20RikQ8CDT5 131 aa12.25□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Trav4-3A0A0B4J1K1 110 aa12.25□□□□□ -0.45
Clcn3-203ENSMUST00000093490 E130218I03RikA0A0U1RNU5 63 aa12.25□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Rmi2Q3UPE3 149 aa12.25□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Gm9513B3GLJ6 99 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Pla2g2cP48076 150 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Prop1P97458 223 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Gm17324Q8C6J8 137 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 P01756 117 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 P01757 117 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 B230307C23RikQ8BLB2 64 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Gm20481G3UXK4 153 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Pglyrp1O88593 182 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Igkv4-59A0A0B4J1I8 117 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Trav9d-4A0A0G2JG37 103 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Mlst8Q9DCJ1 326 aa12.24□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Igkv8-16A0A0G2JDG9 121 aa12.23□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Gm15557A6PWY0 234 aa12.23□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Wnk2Q3UH66 2149 aa12.23□□□□□ -0.45
Clcn3-203ENSMUST00000093490 MplkipQ9D011 178 aa12.23□□□□□ -0.45
Clcn3-203ENSMUST00000093490 NpbQ8K4P1 119 aa12.23□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Gm10295Q8CCF3 114 aa12.23□□□□□ -0.45
Clcn3-203ENSMUST00000093490 P01750 117 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 P01837 106 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Defa21Q8C1P2 93 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Tm2d1Q99MB3 208 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Gm15294V9GXA7 121 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Akap6E9Q9K8 2307 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Igkv6-13A0A0G2JGY3 119 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 1500011B03RikQ3TTH7 73 aa12.22□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Igkv4-54A0A0G2JES9 117 aa12.21□□□□□ -0.45
Clcn3-203ENSMUST00000093490 BC048562Q80ZQ7 204 aa12.21□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Oxld1Q9CR10 201 aa12.21□□□□□ -0.45
Clcn3-203ENSMUST00000093490 Hoxd3P09027 433 aa12.21□□□□□ -0.46
Clcn3-203ENSMUST00000093490 NrgnP60761 78 aa12.21□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Fam24aQ8CF27 98 aa12.21□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Rp1l1Q8CGM2 1859 aa12.21□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Chchd5Q9CQP3 110 aa12.21□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Timm17aQ9Z0V8 171 aa12.21□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Ighv1-12A0A0A6YXJ9 117 aa12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 SelenowP63300 88 aa12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Igkv4-72A0A0B4J1I4 117 aa12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Trip12G5E870 2025 aaKnown RBP12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Atp6v0e2Q91XE7 81 aa12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Sec16aA2AIX1 2377 aa12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 9230109A22RikQ8BHE6 111 aa12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Q99M08 65 aa12.2□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Ndufa12Q7TMF3 145 aaKnown RBP12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Iglc1A0A0G2JE99 106 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 P01843 105 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 NpyP57774 97 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Gm5468Q8C3D3 155 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Gm4861Q8C5A4 106 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Ndufa1O35683 70 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 7420426K07RikQ3UX66 186 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Parp4E9PYK3 1969 aa12.19□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Vsig4F6TUL9 280 aa12.18□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Rbmy1bQ60990 380 aa12.18□□□□□ -0.46
Clcn3-203ENSMUST00000093490 BlcapP62951 87 aa12.18□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Pcsk5Q04592 1877 aa12.18□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Gm26602M0QWA4 95 aa12.18□□□□□ -0.46
Clcn3-203ENSMUST00000093490 P04944 107 aa12.18□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Arhgap21Q6DFV3 1944 aa12.18□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Foxi2Q3I5G5 311 aa12.17□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Zfand3Q497H0 227 aa12.17□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Spink12Q9D256 87 aa12.17□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Ighv12-3A0A075B5T1 117 aa12.17□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Gm20708H3BKF4 155 aa12.17□□□□□ -0.46
Clcn3-203ENSMUST00000093490 P01745 121 aa12.17□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Igkv4-69A0A0B4J1I6 116 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 PemtQ61907 199 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Tax1bp3Q9DBG9 124 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Bub3Q9WVA3 326 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Ang4Q3TMQ6 144 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Nop10Q9CQS2 64 aa12.16□□□□□ -0.46
Clcn3-203ENSMUST00000093490 Igkv4-78A0A0A6YYE5 119 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms