RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Igkv4-74A0A0B4J1I3 119 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Prss29Q99MS4 279 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Usmg5Q78IK2 58 aa14.07□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Gm14137Q8CE97 175 aa14.07□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Krtap26-1Q9D7N2 215 aa14.07□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 P01837 106 aa14.07□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Q9CX63 252 aa14.07□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Atxn7l1Q9CZ05 146 aa14.07□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Ighv1-50A0A075B5W1 117 aa14.06□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 P06328 117 aa14.06□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 S100a8P27005 89 aa14.06□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Ss18Q62280 418 aa14.06□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Csmd2V9GX34 3611 aa14.06□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Iglc1A0A0G2JE99 106 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 LhbO09108 141 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Vamp8O70404 101 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 P01843 105 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Olfr313Q5NC55 308 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Dppa2Q9CWH0 301 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Gm10226O88253 85 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 P01643 108 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 P01726 129 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Cks1brtQ3UNC9 96 aa14.05□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Bri3P28662 125 aa14.04□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Gm11565A2A4M7 156 aa14.04□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Smr3aQ61900 147 aa14.04□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Cby1Q9D1C2 127 aa14.04□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Lelp1Q9DAE3 120 aa14.04□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Col6a4A2AX52 2309 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Ighv1-66A0A075B5X5 117 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Rpl36-ps4A0A140T8U4 117 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Gm10271F6WY25 52 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 P01812 117 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Defb45Q3V490 66 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Try10Q792Z1 246 aaKnown RBP14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Q9D727 114 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Pradc1Q9D9N8 188 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Esp4A8R0T8 117 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Csn3P06796 181 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 PlaurP35456 327 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Klk7Q91VE3 249 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Iah1Q9DB29 249 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Gm26920S4R2A5 56 aa14.03□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Gm37988J3QM41 62 aa14.02□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Rpl32P62911 135 aaKnown RBP14.02□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Tmem170bP86050 132 aa14.02□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Trav8-1A0A075B641 109 aa14.02□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Fam240aJ3QNP9 97 aa14.02□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Tcrg-C3L7N479 172 aa14.02□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 P03985 172 aa14.02□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Egr2P08152 470 aa14.02□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Ndufb4Q9CQC7 129 aa14.02□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 SonQ9QX47 2444 aaKnown RBP14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Gm44965A0A0N4SVR3 59 aa14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Tmem262D3Z338 116 aa14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Gm10295Q8CCF3 114 aa14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 AamdcQ8R0P4 122 aa14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 3110018I06RikQ9CXS0 120 aa14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Trbv13-1A0A0B4J1P8 112 aa14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Gm9925F6T2U3 160 aa14.01□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Polr2kQ63871 58 aa14□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Rbmxl2Q9DAE2 385 aaKnown RBP14□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Itpr3P70227 2670 aa14□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Rpl24Q8BP67 157 aaKnown RBP14□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Plac1Q9JI83 173 aa14□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Igkv4-62A0A0G2JDW9 117 aa13.99□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 MsmbO08540 113 aa13.99□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 P01741 114 aa13.99□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 1500011B03RikQ3TTH7 73 aa13.99□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Slamf6Q9ET39 351 aa13.99□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Ighv1-12A0A0A6YXJ9 117 aa13.98□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 BC025920Q3US60 128 aa13.98□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Gphb5Q812B2 130 aa13.98□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Taf15Q8BQ46 557 aaKnown RBP13.98□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 PmvkQ9D1G2 192 aa13.98□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 A730046J19RikA0A1B0GSN8 89 aa13.98□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 LbhQ9CX60 105 aa13.98□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Gm17455G3UW87 128 aa13.97□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Spink13Q3UTS8 97 aa13.97□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Gm9961Q8BNV2 113 aa13.97□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 C1qcQ02105 246 aa13.96□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Trav7-2Q5R1I3 112 aa13.96□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Itpr1P11881 2749 aa13.96□□□□□ -0.17
Shkbp1-201ENSMUST00000003857 Trbv16A0A0B4J1H3 115 aa13.96□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Wfdc15aQ8BH89 80 aa13.96□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Q9D8Q6 235 aa13.96□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Ighv14-1A0A075B5R4 117 aa13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Gm20499D3Z4G5 72 aa13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Rpl39P62892 51 aa13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Foxi1Q922I5 372 aa13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Lyzl4Q9D925 145 aa13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Ccl25O35903 144 aa13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Hint1P70349 126 aaKnown RBP13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Prr3Q811B5 190 aaKnown RBP13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Hrct1Q9D6B9 109 aa13.95□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Ighv1-63A0A075B5X2 117 aa13.94□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Igkv2-137A0A0B4J1H6 120 aa13.94□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Defa37K9J724 93 aa13.94□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Ccl19O70460 108 aa13.94□□□□□ -0.18
Shkbp1-201ENSMUST00000003857 Defa5P28312 93 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms