RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	SRX1	P36077	127 aa		5	□□□□□ -1.61
NHP6A	YPR052C	YBR056W	P38081	501 aa		5	□□□□□ -1.61
NHP6A	YPR052C	YSW1	P38280	609 aa		5	□□□□□ -1.61
NHP6A	YPR052C	YBR225W	P38321	900 aa		5	□□□□□ -1.61
NHP6A	YPR052C	LEU5	P38702	357 aa		5	□□□□□ -1.61
NHP6A	YPR052C	BAT1	P38891	393 aa	Known RBP	5	□□□□□ -1.61
NHP6A	YPR052C	ERP2	P39704	215 aa		5	□□□□□ -1.61
NHP6A	YPR052C	SAW1	P39735	261 aa		5	□□□□□ -1.61
NHP6A	YPR052C	DSE1	P40077	573 aa		5	□□□□□ -1.61
NHP6A	YPR052C	DSN1	P40568	576 aa		5	□□□□□ -1.61
NHP6A	YPR052C	ALA1	P40825	983 aa	Known RBP	5	□□□□□ -1.61
NHP6A	YPR052C	GUF1	P46943	645 aa		5	□□□□□ -1.61
NHP6A	YPR052C	COG6	P53959	839 aa		5	□□□□□ -1.61
NHP6A	YPR052C	YAT1	P80235	687 aa		5	□□□□□ -1.61
NHP6A	YPR052C	YMR027W	Q04371	470 aa		5	□□□□□ -1.61
NHP6A	YPR052C	FAR8	Q05040	523 aa		5	□□□□□ -1.61
NHP6A	YPR052C	CDC73	Q06697	393 aa		5	□□□□□ -1.61
NHP6A	YPR052C	RPN8	Q08723	338 aa	Known RBP	5	□□□□□ -1.61
NHP6A	YPR052C	FAP7	Q12055	197 aa	Predicted RBP	5	□□□□□ -1.61
NHP6A	YPR052C	RTK1	Q12100	620 aa	Predicted RBP	5	□□□□□ -1.61
NHP6A	YPR052C	NBP2	Q12163	236 aa		5	□□□□□ -1.61
NHP6A	YPR052C	PRP16	P15938	1071 aa	Predicted RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	CDC10	P25342	322 aa	Known RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	CCR4	P31384	837 aa	Known RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	HXT3	P32466	567 aa	Known RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	DSS4	P32601	143 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	LOS1	P33418	1100 aa	Predicted RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	YBR062C	P38239	180 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	SIF2	P38262	535 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	YBP1	P38315	674 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	MSR1	P38714	643 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	AVT2	P39981	480 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	MRX1	P40050	688 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	YIR007W	P40566	764 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	ERG10	P41338	398 aa	Known RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	HLJ1	P48353	224 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	FLC3	P53121	802 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	COQ6	P53318	479 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	YNL247W	P53852	767 aa	Known RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	YPL014W	Q02606	381 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	SMA1	Q02651	245 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	MUB1	Q03162	620 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	ECM22	Q05958	814 aa	Predicted RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	TDA5	Q06417	326 aa	Known RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	MDM38	Q08179	573 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	CLP1	Q08685	445 aa	Predicted RBP	4.99	□□□□□ -1.61
NHP6A	YPR052C	AVL9	Q12500	764 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	VPS5	Q92331	675 aa		4.99	□□□□□ -1.61
NHP6A	YPR052C	HSF1	P10961	833 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	YPK1	P12688	680 aa	Known RBP	4.98	□□□□□ -1.61
NHP6A	YPR052C	MRPL25	P23369	157 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	KAR4	P25583	335 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	STE13	P33894	931 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	SQT1	P35184	431 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	HSL7	P38274	827 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	YBR238C	P38330	731 aa	Known RBP	4.98	□□□□□ -1.61
NHP6A	YPR052C	OCA5	P38738	679 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	SPC97	P38863	823 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	LYS9	P38999	446 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	HEM14	P40012	539 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	UFE1	P41834	346 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	TDA10	P42938	290 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	SAE2	P46946	345 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	YGR283C	P53336	341 aa	Predicted RBP	4.98	□□□□□ -1.61
NHP6A	YPR052C	COP1	P53622	1201 aa	Known RBP	4.98	□□□□□ -1.61
NHP6A	YPR052C	TDA7	P53882	636 aa	Predicted RBP	4.98	□□□□□ -1.61
NHP6A	YPR052C	YNL108C	P53929	270 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	CIR2	Q08822	631 aa		4.98	□□□□□ -1.61
NHP6A	YPR052C	YPL225W	Q08971	146 aa	Known RBP	4.98	□□□□□ -1.61
NHP6A	YPR052C	ACC1	Q00955	2233 aa	Known RBP	4.98	□□□□□ -1.61
NHP6A	YPR052C	RAD3	P06839	778 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	MSF1	P08425	469 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	ILS1	P09436	1072 aa	Known RBP	4.97	□□□□□ -1.61
NHP6A	YPR052C	LRE1	P25579	583 aa	Known RBP	4.97	□□□□□ -1.61
NHP6A	YPR052C	CDC20	P26309	610 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	SET3	P36124	751 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	MRPL40	P36534	297 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	ECM13	P38195	257 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	YBR032W	P38223	100 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	SMF2	P38778	549 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	PFD1	P46988	109 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	AIM23	P47015	356 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	VTC4	P47075	721 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	PYK2	P52489	506 aa	Known RBP	4.97	□□□□□ -1.61
NHP6A	YPR052C	NMA111	P53920	997 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	YNL011C	P53980	444 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	BET4	Q00618	327 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	RKM2	Q03942	479 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	RTN1	Q04947	295 aa	Known RBP	4.97	□□□□□ -1.61
NHP6A	YPR052C	YDR338C	Q05497	695 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	ADE13	Q05911	482 aa	Known RBP	4.97	□□□□□ -1.61
NHP6A	YPR052C	THI21	Q08975	551 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	IZH4	Q99393	312 aa		4.97	□□□□□ -1.61
NHP6A	YPR052C	COX3	P00420	269 aa		4.96	□□□□□ -1.62
NHP6A	YPR052C	TEF1	P02994	458 aa	Known RBP	4.96	□□□□□ -1.62
NHP6A	YPR052C	IMA3	P0CW40	589 aa		4.96	□□□□□ -1.62
NHP6A	YPR052C	IMA4	P0CW41	589 aa		4.96	□□□□□ -1.62
NHP6A	YPR052C	ARG1	P22768	420 aa		4.96	□□□□□ -1.62
NHP6A	YPR052C	ERG6	P25087	383 aa	Known RBP	4.96	□□□□□ -1.62
NHP6A	YPR052C	URA7	P28274	579 aa	Known RBP	4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 69.8 ms