RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	LAS21	P40367	830 aa		3.15	□□□□□ -1.91
RUD3	YOR216C	PEF1	P53238	335 aa		3.15	□□□□□ -1.91
RUD3	YOR216C	PTA1	Q01329	785 aa	Predicted RBP	3.15	□□□□□ -1.91
RUD3	YOR216C	ECM16	Q04217	1267 aa	Known RBP	3.15	□□□□□ -1.91
RUD3	YOR216C	SMA2	Q04658	369 aa		3.15	□□□□□ -1.91
RUD3	YOR216C	LCB4	Q12246	624 aa		3.15	□□□□□ -1.91
RUD3	YOR216C	CBP3	P21560	335 aa		3.14	□□□□□ -1.91
RUD3	YOR216C	PLC1	P32383	869 aa		3.14	□□□□□ -1.91
RUD3	YOR216C	NOP2	P40991	618 aa	Known RBP	3.14	□□□□□ -1.91
RUD3	YOR216C	GZF3	P42944	551 aa	Known RBP	3.14	□□□□□ -1.91
RUD3	YOR216C	SAD1	P43589	448 aa		3.14	□□□□□ -1.91
RUD3	YOR216C	UBP16	Q02863	499 aa		3.14	□□□□□ -1.91
RUD3	YOR216C	DIG1	Q03063	452 aa	Known RBP	3.14	□□□□□ -1.91
RUD3	YOR216C	PLM2	Q04383	521 aa		3.14	□□□□□ -1.91
RUD3	YOR216C	YLR281C	Q05863	155 aa		3.14	□□□□□ -1.91
RUD3	YOR216C	RPL42A	P0CX27	106 aa	Known RBP	3.13	□□□□□ -1.91
RUD3	YOR216C	RPL42B	P0CX28	106 aa	Known RBP	3.13	□□□□□ -1.91
RUD3	YOR216C	YND1	P40009	630 aa		3.13	□□□□□ -1.91
RUD3	YOR216C	BET4	Q00618	327 aa		3.13	□□□□□ -1.91
RUD3	YOR216C	GSH2	Q08220	491 aa		3.13	□□□□□ -1.91
RUD3	YOR216C	MAM1	P40065	302 aa		3.12	□□□□□ -1.91
RUD3	YOR216C	YJL107C	P42947	387 aa		3.12	□□□□□ -1.91
RUD3	YOR216C	ACS1	Q01574	713 aa		3.12	□□□□□ -1.91
RUD3	YOR216C	MTQ2	Q03920	221 aa	Predicted RBP	3.12	□□□□□ -1.91
RUD3	YOR216C	TYS1	P36421	394 aa	Known RBP	3.11	□□□□□ -1.91
RUD3	YOR216C	RKM3	P38222	552 aa		3.11	□□□□□ -1.91
RUD3	YOR216C	MNN11	P46985	422 aa	Known RBP	3.11	□□□□□ -1.91
RUD3	YOR216C	YML053C	Q04978	212 aa		3.11	□□□□□ -1.91
RUD3	YOR216C	NGL1	Q08213	363 aa	Known RBP	3.11	□□□□□ -1.91
RUD3	YOR216C	NOP14	Q99207	810 aa	Known RBP	3.11	□□□□□ -1.91
RUD3	YOR216C	AEP2	P22136	580 aa		3.1	□□□□□ -1.91
RUD3	YOR216C	RRP8	P38961	392 aa	Known RBP	3.1	□□□□□ -1.91
RUD3	YOR216C	OSW7	P43611	510 aa		3.1	□□□□□ -1.91
RUD3	YOR216C	COS12	P53053	380 aa		3.1	□□□□□ -1.91
RUD3	YOR216C	YNL144C	P53907	740 aa		3.1	□□□□□ -1.91
RUD3	YOR216C	YER175W-A	Q8TGU4	54 aa		3.1	□□□□□ -1.91
RUD3	YOR216C	DID4	P36108	232 aa		3.09	□□□□□ -1.91
RUD3	YOR216C	YTM1	Q12024	460 aa	Predicted RBP	3.09	□□□□□ -1.91
RUD3	YOR216C	ATP12	P22135	325 aa		3.09	□□□□□ -1.92
RUD3	YOR216C	CWH43	P25618	953 aa		3.09	□□□□□ -1.92
RUD3	YOR216C	DHH1	P39517	506 aa	Known RBP	3.09	□□□□□ -1.92
RUD3	YOR216C	UBP7	P40453	1071 aa		3.09	□□□□□ -1.92
RUD3	YOR216C	YDL242W	Q07746	117 aa		3.09	□□□□□ -1.92
RUD3	YOR216C	THI73	Q07904	523 aa		3.09	□□□□□ -1.92
RUD3	YOR216C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.92	not detected
RUD3	YOR216C	SES1	P07284	462 aa	Known RBP	3.08	□□□□□ -1.92
RUD3	YOR216C	ARN1	P38731	627 aa		3.08	□□□□□ -1.92
RUD3	YOR216C	ORC5	P50874	479 aa		3.08	□□□□□ -1.92
RUD3	YOR216C	MDR1	P53258	950 aa		3.08	□□□□□ -1.92
RUD3	YOR216C	CDC23	P16522	626 aa		3.07	□□□□□ -1.92
RUD3	YOR216C	NIC96	P34077	839 aa		3.07	□□□□□ -1.92
RUD3	YOR216C	PCL6	P40038	420 aa		3.07	□□□□□ -1.92
RUD3	YOR216C	IMP4	P53941	290 aa	Known RBP	3.07	□□□□□ -1.92
RUD3	YOR216C	FPR4	Q06205	392 aa	Predicted RBP	3.07	□□□□□ -1.92
RUD3	YOR216C	ARG1	P22768	420 aa		3.06	□□□□□ -1.92
RUD3	YOR216C	GSH1	P32477	678 aa		3.06	□□□□□ -1.92
RUD3	YOR216C	QRI7	P43122	407 aa		3.06	□□□□□ -1.92
RUD3	YOR216C	YAT1	P80235	687 aa		3.06	□□□□□ -1.92
RUD3	YOR216C	FCP1	Q03254	732 aa		3.06	□□□□□ -1.92
RUD3	YOR216C	FMP42	Q04991	504 aa		3.06	□□□□□ -1.92
RUD3	YOR216C	VPS5	Q92331	675 aa		3.06	□□□□□ -1.92
RUD3	YOR216C	PRP16	P15938	1071 aa	Predicted RBP	3.05	□□□□□ -1.92
RUD3	YOR216C	SER1	P33330	395 aa	Known RBP	3.05	□□□□□ -1.92
RUD3	YOR216C	STB5	P38699	743 aa		3.05	□□□□□ -1.92
RUD3	YOR216C	ARO9	P38840	513 aa	Predicted RBP	3.05	□□□□□ -1.92
RUD3	YOR216C	IRC5	P43610	853 aa		3.05	□□□□□ -1.92
RUD3	YOR216C	GPN2	Q08726	347 aa	Predicted RBP	3.05	□□□□□ -1.92
RUD3	YOR216C	SRP68	P38687	599 aa	Known RBP	3.04	□□□□□ -1.92
RUD3	YOR216C	HLJ1	P48353	224 aa		3.04	□□□□□ -1.92
RUD3	YOR216C	RNR4	P49723	345 aa	Known RBP	3.04	□□□□□ -1.92
RUD3	YOR216C	YOR378W	Q08902	515 aa		3.04	□□□□□ -1.92
RUD3	YOR216C	TIP41	Q12199	356 aa		3.04	□□□□□ -1.92
RUD3	YOR216C	ADR1	P07248	1323 aa		3.04	□□□□□ -1.92
RUD3	YOR216C	KGD2	P19262	463 aa	Predicted RBP	3.03	□□□□□ -1.92
RUD3	YOR216C	RNH70	P53331	553 aa		3.03	□□□□□ -1.92
RUD3	YOR216C	DNM1	P54861	757 aa		3.03	□□□□□ -1.92
RUD3	YOR216C	URA3	P03962	267 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	MNN2	P38069	597 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	VBA2	P38358	474 aa	Known RBP	3.03	□□□□□ -1.93
RUD3	YOR216C	VPS41	P38959	992 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	FAA2	P39518	744 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	MNT2	P53059	558 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	SND1	Q04007	877 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	RSA1	Q08932	381 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	YLR112W	Q12130	139 aa		3.03	□□□□□ -1.93
RUD3	YOR216C	EXO84	P38261	753 aa		3.02	□□□□□ -1.93
RUD3	YOR216C	BZZ1	P38822	633 aa		3.02	□□□□□ -1.93
RUD3	YOR216C	IZH1	Q03419	316 aa		3.02	□□□□□ -1.93
RUD3	YOR216C	LNP1	P38878	278 aa		3.01	□□□□□ -1.93
RUD3	YOR216C	ROK1	P45818	564 aa	Predicted RBP	3.01	□□□□□ -1.93
RUD3	YOR216C	YLR352W	Q06479	807 aa		3.01	□□□□□ -1.93
RUD3	YOR216C	ILV2	P07342	687 aa	Known RBP	3	□□□□□ -1.93
RUD3	YOR216C	YCR061W	P25639	631 aa		3	□□□□□ -1.93
RUD3	YOR216C	PTC6	P25646	442 aa		3	□□□□□ -1.93
RUD3	YOR216C	SEC1	P30619	724 aa	Known RBP	3	□□□□□ -1.93
RUD3	YOR216C	MSS51	P32335	436 aa		3	□□□□□ -1.93
RUD3	YOR216C	DAL3	P32459	195 aa		3	□□□□□ -1.93
RUD3	YOR216C	TPA1	P40032	644 aa	Known RBP	3	□□□□□ -1.93
RUD3	YOR216C	PEA2	P40091	420 aa		3	□□□□□ -1.93
RUD3	YOR216C	ASG1	P40467	964 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms