RNA–Protein interactions for RNA: YOL087C

DUF1, Transcript of Ubiquitin-binding protein of unknown function, yeast

Gene DUF1, Length 3,351 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DUF1	YOL087C	REG1	Q00816	1014 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	NUR1	Q12066	484 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	ADE8	P04161	214 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	NUC1	P08466	329 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	BIK1	P11709	440 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	VPS3	P23643	1011 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	NFS1	P25374	497 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	PHO91	P27514	894 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
DUF1	YOL087C	LYS9	P38999	446 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	EFM4	P40516	257 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	MRX6	P48564	524 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	PDR16	P53860	351 aa	Known RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	YMR187C	Q03236	431 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	SPH1	Q06160	661 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	BRR1	Q99177	341 aa	Predicted RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	RPL11A	P0C0W9	174 aa	Known RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	DAP2	P18962	818 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	CLB1	P24868	471 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	ITR1	P30605	584 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	MGM101	P32787	269 aa	Known RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	RPT3	P33298	428 aa	Known RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	DAD2	P36162	133 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	ERT1	P38140	529 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	YBR138C	P38277	524 aa		3.11	□□□□□ -1.91
DUF1	YOL087C	KSP1	P38691	1029 aa	Known RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	DUO1	P53168	247 aa	Known RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	GPD1	Q00055	391 aa	Known RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	RPL11B	Q3E757	174 aa	Predicted RBP	3.11	□□□□□ -1.91
DUF1	YOL087C	CAR2	P07991	424 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	RPS4A	P0CX35	261 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	RPS4B	P0CX36	261 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	ADH4	P10127	382 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
DUF1	YOL087C	PHO3	P24031	467 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	YKL151C	P36059	337 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	PNT1	P38969	423 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	YIL092W	P40497	633 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	SDS3	P40505	327 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	HXT16	P47185	567 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	JJJ1	P53863	590 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	PUS7	Q08647	676 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	NMD4	Q12129	218 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	HER1	Q12276	1246 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	RPS9A	O13516	197 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	RPS9B	P05755	195 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	NOT3	P06102	836 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	GRR1	P24814	1151 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	HXT4	P32467	576 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	STB6	P36085	766 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	SET3	P36124	751 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	MSR1	P38714	643 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	PSD1	P39006	500 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	IRC5	P43610	853 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	ASE1	P50275	885 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	NCS6	P53088	359 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	MLC1	P53141	149 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	PIB2	P53191	635 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	GYL1	Q04322	720 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	ECM7	Q06200	448 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	ARR2	Q06597	130 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	SLK19	Q08581	821 aa	Known RBP	3.1	□□□□□ -1.91
DUF1	YOL087C	GNT1	Q12096	491 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	GPM3	Q12326	303 aa		3.1	□□□□□ -1.91
DUF1	YOL087C	TDH1	P00360	332 aa	Known RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	SAM35	P14693	329 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	SNF5	P18480	905 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	PRP22	P24384	1145 aa	Known RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	PTR2	P32901	601 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	SRP101	P32916	621 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	SRB2	P34162	210 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	SLX1	P38324	304 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	TDA3	P38758	523 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	YHR097C	P38809	366 aa	Known RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	STT3	P39007	718 aa	Known RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	MTW1	P39731	289 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	EAF5	P39995	279 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	MET18	P40469	1032 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	ART5	P53244	586 aa	Known RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	YNL144C	P53907	740 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	TPP1	Q03796	238 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	RPN7	Q06103	429 aa	Known RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	BOP2	Q06150	570 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	RIP-Chip
DUF1	YOL087C	GET3	Q12154	354 aa	Known RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	AHC1	Q12433	566 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	YPR053C	Q6Q5F3	151 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	ARG81	P05085	880 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	ARG80	P07249	177 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
DUF1	YOL087C	NNK1	P36003	928 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	UBP11	P36026	717 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	PPE1	P38796	400 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	YEL025C	P39991	1188 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	BPL1	P48445	690 aa	Predicted RBP	3.09	□□□□□ -1.91
DUF1	YOL087C	GCV2	P49095	1034 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	HNT2	P49775	206 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	BSC5	P53755	489 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	KTR6	P54070	446 aa		3.09	□□□□□ -1.91
DUF1	YOL087C	SEG1	Q04279	960 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms