RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YCL001W-B	Q96VH2	84 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	YPT6	Q99260	215 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	GAL3	P13045	520 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	RAD4	P14736	754 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	POL3	P15436	1097 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	SEC1	P30619	724 aa	Known RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	HES1	P35843	434 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	NTR2	P36118	322 aa	Predicted RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	STV1	P37296	890 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	SLM4	P38247	162 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	YFR018C	P43599	363 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	UPF3	P48412	387 aa	Known RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	YGR125W	P53273	1036 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	HOL1	P53389	586 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	CAF120	P53836	1060 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	GFD1	Q04839	188 aa	Known RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	NTG2	Q08214	380 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	PHM7	Q12252	991 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	DUR1,2	P32528	1835 aa	Known RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	YMR084W	A2P2R3	262 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	RPN13	O13563	156 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	GPM1	P00950	247 aa	Known RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	MRP13	P12686	339 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	VMA16	P23968	213 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	PEX3	P28795	441 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	TFC1	P32367	649 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	SPT10	P35208	640 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	ANR2	P36090	516 aa	Predicted RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	AIM10	P39965	576 aa	Known RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	IES5	P40060	125 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	GYP8	P43570	497 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	IRC5	P43610	853 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	MSE1	P48525	536 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	PRP24	P49960	444 aa	Known RBP	7.25	□□□□□ -1.25
MSB3	YNL293W	YKE2	P52553	114 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	RAD30	Q04049	632 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	YMR027W	Q04371	470 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	MHR1	Q06630	226 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	RAD61	Q99359	647 aa		7.25	□□□□□ -1.25
MSB3	YNL293W	THS1	P04801	734 aa	Known RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	FUR4	P05316	633 aa	Known RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	RPP1A	P05318	106 aa	Predicted RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	RPS6A	P0CX37	236 aa	Known RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	RPS6B	P0CX38	236 aa	Predicted RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	SPO12	P17123	173 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	RIT1	P23796	513 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.24	□□□□□ -1.25	not detected
MSB3	YNL293W	ATG22	P25568	528 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	NAM9	P27929	486 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	MRT4	P33201	236 aa	Known RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	NUP133	P36161	1157 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	RFC3	P38629	340 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	YHL017W	P38745	532 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	YNL320W	P42840	284 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	YGR210C	P42942	411 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	YGL117W	P53133	265 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	MNP1	P53163	194 aa	Predicted RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	DRN1	P53255	507 aa	Known RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	ALD6	P54115	500 aa	Known RBP	7.24	□□□□□ -1.25
MSB3	YNL293W	SDH1	Q00711	640 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	YMR279C	Q03263	540 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	NHP10	Q03435	203 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	DLT1	Q04216	342 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	VTA1	Q06263	330 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	MUM3	Q08750	479 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	RIM20	Q12033	661 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	ATG31	Q12421	196 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	ATG11	Q12527	1178 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	YOR111W	Q99210	232 aa		7.24	□□□□□ -1.25
MSB3	YNL293W	TRP3	P00937	484 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	TUB3	P09734	445 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	OM45	P16547	393 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	MRPL32	P25348	183 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YCR101C	P25607	182 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	CPR3	P25719	182 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	CMK1	P27466	446 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	ICL1	P28240	557 aa	Predicted RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	ORC2	P32833	620 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	VAM7	P32912	316 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	PPS1	P38148	807 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	CDS1	P38221	457 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	HSE1	P38753	452 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	SAW1	P39735	261 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	EMW1	P42842	904 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	COS4	P43542	379 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	COS5	P47187	383 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YGL108C	P53139	140 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	COS1	P53822	381 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YNL115C	P53925	644 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	VHS1	Q03785	461 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	CRR1	Q05790	422 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YLR352W	Q06479	807 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YFT2	Q06676	274 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	BRE4	Q07660	1125 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	GYP1	Q08484	637 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	NTO1	Q12311	748 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	CBP2	P03874	630 aa	Predicted RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	RPS19A	P07280	144 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	RPS19B	P07281	144 aa	Predicted RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	NSP1	P14907	823 aa	Known RBP	7.23	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms