RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W PSD1P39006 500 aa5.02□□□□□ -1.61
YML040WYML040W NMA2P53204 395 aa5.02□□□□□ -1.61
YML040WYML040W DIP5P53388 608 aa5.02□□□□□ -1.61
YML040WYML040W SMX3P54999 86 aaPredicted RBP5.02□□□□□ -1.61
YML040WYML040W TY2A-DR2Q03483 438 aa5.02□□□□□ -1.61
YML040WYML040W TY2A-BQ12260 438 aa5.02□□□□□ -1.61
YML040WYML040W TY2A-OR2Q12293 438 aa5.02□□□□□ -1.61
YML040WYML040W TY2A-DR1Q12392 438 aa5.02□□□□□ -1.61
YML040WYML040W TY2A-OR1Q12439 438 aa5.02□□□□□ -1.61
YML040WYML040W RVB2Q12464 471 aaKnown RBP5.02□□□□□ -1.61
YML040WYML040W TY2A-DR3Q99303 438 aa5.02□□□□□ -1.61
YML040WYML040W RPB2P08518 1224 aaKnown RBP5.01□□□□□ -1.61
YML040WYML040W CNS1P33313 385 aa5.01□□□□□ -1.61
YML040WYML040W MFT1P33441 392 aaKnown RBP5.01□□□□□ -1.61
YML040WYML040W CCL1P37366 393 aa5.01□□□□□ -1.61
YML040WYML040W COG1P53079 417 aa5.01□□□□□ -1.61
YML040WYML040W YNL092WP53934 400 aa5.01□□□□□ -1.61
YML040WYML040W DAK1P54838 584 aaKnown RBP5.01□□□□□ -1.61
YML040WYML040W KIN4Q01919 800 aa5.01□□□□□ -1.61
YML040WYML040W TSR2Q06672 205 aaKnown RBP5.01□□□□□ -1.61
YML040WYML040W BMS1Q08965 1183 aaKnown RBP5.01□□□□□ -1.61
YML040WYML040W YBR255C-AQ3E776 120 aa5.01□□□□□ -1.61
YML040WYML040W RPL19AP0CX82 189 aaKnown RBP5□□□□□ -1.61
YML040WYML040W RPL19BP0CX83 189 aaPredicted RBP5□□□□□ -1.61
YML040WYML040W ESL2P36168 1195 aa5□□□□□ -1.61
YML040WYML040W UBP5P39944 805 aa5□□□□□ -1.61
YML040WYML040W NDC80P40460 691 aa5□□□□□ -1.61
YML040WYML040W ZAP1P47043 880 aa5□□□□□ -1.61
YML040WYML040W SRB7P47822 140 aa5□□□□□ -1.61
YML040WYML040W YIP4P53093 235 aa5□□□□□ -1.61
YML040WYML040W SSL2Q00578 843 aa5□□□□□ -1.61
YML040WYML040W MFM1Q02783 413 aa5□□□□□ -1.61
YML040WYML040W GSF2Q04697 403 aaKnown RBP5□□□□□ -1.61
YML040WYML040W RCO1Q04779 684 aa5□□□□□ -1.61
YML040WYML040W CRF1Q04930 467 aa5□□□□□ -1.61
YML040WYML040W INH1P01097 85 aa4.99□□□□□ -1.61
YML040WYML040W MET8P15807 274 aa4.99□□□□□ -1.61
YML040WYML040W MRP20P32387 263 aa4.99□□□□□ -1.61
YML040WYML040W APL3P38065 1025 aa4.99□□□□□ -1.61
YML040WYML040W ARO9P38840 513 aaPredicted RBP4.99□□□□□ -1.61
YML040WYML040W ARG2P40360 574 aa4.99□□□□□ -1.61
YML040WYML040W BUD17P53727 317 aa4.99□□□□□ -1.61
YML040WYML040W YNR061CP53747 219 aa4.99□□□□□ -1.61
YML040WYML040W GIR2Q03768 265 aaPredicted RBP4.99□□□□□ -1.61
YML040WYML040W ENT1Q12518 454 aa4.99□□□□□ -1.61
YML040WYML040W PNO1Q99216 274 aaKnown RBP4.99□□□□□ -1.61
YML040WYML040W LAM4P38800 1345 aa4.99□□□□□ -1.61
YML040WYML040W ATP2P00830 511 aaKnown RBP4.98□□□□□ -1.61
YML040WYML040W YML003WP0CF16 290 aa4.98□□□□□ -1.61
YML040WYML040W YJL206CP39529 758 aa4.98□□□□□ -1.61
YML040WYML040W YJR061WP40355 935 aa4.98□□□□□ -1.61
YML040WYML040W IST3P40565 148 aaPredicted RBP4.98□□□□□ -1.61
YML040WYML040W VPS4P52917 437 aa4.98□□□□□ -1.61
YML040WYML040W IMO32P53219 342 aa4.98□□□□□ -1.61
YML040WYML040W SPC98P53540 846 aa4.98□□□□□ -1.61
YML040WYML040W REG1Q00816 1014 aa4.98□□□□□ -1.61
YML040WYML040W MTG1Q03151 367 aaPredicted RBP4.98□□□□□ -1.61
YML040WYML040W GTB1Q04924 702 aa4.98□□□□□ -1.61
YML040WYML040W STP3Q05937 343 aa4.98□□□□□ -1.61
YML040WYML040W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
YML040WYML040W PRS5Q12265 496 aaKnown RBP4.98□□□□□ -1.61
YML040WYML040W VCX1Q99385 411 aa4.98□□□□□ -1.61
YML040WYML040W KGD2P19262 463 aaPredicted RBP4.97□□□□□ -1.61
YML040WYML040W ERG8P24521 451 aa4.97□□□□□ -1.61
YML040WYML040W NFU1P32860 256 aa4.97□□□□□ -1.61
YML040WYML040W YHL017WP38745 532 aa4.97□□□□□ -1.61
YML040WYML040W PCL5P38794 229 aa4.97□□□□□ -1.61
YML040WYML040W ARC1P46672 376 aaKnown RBP4.97□□□□□ -1.61
YML040WYML040W BSC5P53755 489 aa4.97□□□□□ -1.61
YML040WYML040W ESC8Q08119 714 aa4.97□□□□□ -1.61
YML040WYML040W TMA16Q08687 178 aa4.97□□□□□ -1.61
YML040WYML040W Q0010Q9ZZX9 128 aa4.97□□□□□ -1.61
YML040WYML040W OLE1P21147 510 aaKnown RBP4.97□□□□□ -1.61
YML040WYML040W AMD2P22580 549 aa4.97□□□□□ -1.61
YML040WYML040W CMK1P27466 446 aaKnown RBP4.97□□□□□ -1.61
YML040WYML040W GCD7P32502 381 aaPredicted RBP4.97□□□□□ -1.61
YML040WYML040W TRM2P33753 639 aa4.97□□□□□ -1.61
YML040WYML040W NUP120P35729 1037 aa4.97□□□□□ -1.61
YML040WYML040W JNM1P36224 373 aa4.97□□□□□ -1.61
YML040WYML040W TDP1P38319 544 aa4.97□□□□□ -1.61
YML040WYML040W MIT1P40002 666 aa4.97□□□□□ -1.61
YML040WYML040W LYS14P40971 790 aa4.97□□□□□ -1.61
YML040WYML040W THI6P41835 540 aa4.97□□□□□ -1.61
YML040WYML040W CCT7P42943 550 aaKnown RBP4.97□□□□□ -1.61
YML040WYML040W ASE1P50275 885 aa4.97□□□□□ -1.61
YML040WYML040W NRD1P53617 575 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
YML040WYML040W YSA1Q01976 231 aa4.97□□□□□ -1.61
YML040WYML040W MUK1Q02866 612 aa4.97□□□□□ -1.61
YML040WYML040W YDR179W-AQ03983 463 aa4.97□□□□□ -1.61
YML040WYML040W PSK2Q08217 1101 aa4.97□□□□□ -1.61
YML040WYML040W YPL216WQ08964 1102 aa4.97□□□□□ -1.61
YML040WYML040W YLR302CO13544 120 aa4.96□□□□□ -1.62
YML040WYML040W TUB2P02557 457 aaKnown RBP4.96□□□□□ -1.62
YML040WYML040W AAC1P04710 309 aa4.96□□□□□ -1.62
YML040WYML040W MRP7P12687 371 aa4.96□□□□□ -1.62
YML040WYML040W YPK1P12688 680 aaKnown RBP4.96□□□□□ -1.62
YML040WYML040W SWC3P31376 625 aa4.96□□□□□ -1.62
YML040WYML040W GMH1P36125 273 aa4.96□□□□□ -1.62
YML040WYML040W CHS7P38843 316 aa4.96□□□□□ -1.62
YML040WYML040W AIM21P40563 679 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms