RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C CHS2P14180 963 aa2.42□□□□□ -2.02
VPS13YLL040C PHO81P17442 1178 aa2.42□□□□□ -2.02
VPS13YLL040C PRP19P32523 503 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C NUP120P35729 1037 aa2.42□□□□□ -2.02
VPS13YLL040C NTR2P36118 322 aaPredicted RBP2.42□□□□□ -2.02
VPS13YLL040C CAF4P36130 643 aa2.42□□□□□ -2.02
VPS13YLL040C CYC2P38909 366 aa2.42□□□□□ -2.02
VPS13YLL040C OAF1P39720 1047 aaPredicted RBP2.42□□□□□ -2.02
VPS13YLL040C NOP9P47077 666 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C YLH47Q06493 454 aa2.42□□□□□ -2.02
VPS13YLL040C TRM11Q12463 433 aa2.42□□□□□ -2.02
VPS13YLL040C LDB19Q12502 818 aa2.42□□□□□ -2.02
VPS13YLL040C YKU70P32807 602 aa2.42□□□□□ -2.02
VPS13YLL040C MCR1P36060 302 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C BUD13P46947 266 aaPredicted RBP2.42□□□□□ -2.02
VPS13YLL040C FMS1P50264 508 aa2.42□□□□□ -2.02
VPS13YLL040C TEL2P53038 688 aa2.42□□□□□ -2.02
VPS13YLL040C YNL181WP53878 407 aa2.42□□□□□ -2.02
VPS13YLL040C YNL146WP53906 100 aa2.42□□□□□ -2.02
VPS13YLL040C CIK1Q01649 594 aa2.42□□□□□ -2.02
VPS13YLL040C CHS5Q12114 671 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C RAD18P10862 487 aa2.42□□□□□ -2.02
VPS13YLL040C TOP3P13099 656 aa2.42□□□□□ -2.02
VPS13YLL040C POL3P15436 1097 aa2.42□□□□□ -2.02
VPS13YLL040C SEC15P22224 910 aa2.42□□□□□ -2.02
VPS13YLL040C PKC1P24583 1151 aa2.42□□□□□ -2.02
VPS13YLL040C GDH2P33327 1092 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C CLG1P35190 452 aa2.42□□□□□ -2.02
VPS13YLL040C CCL1P37366 393 aa2.42□□□□□ -2.02
VPS13YLL040C PCS60P38137 543 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02 RIP-Chip
VPS13YLL040C GUA1P38625 525 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C NBP35P52920 328 aa2.42□□□□□ -2.02
VPS13YLL040C CPR6P53691 371 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C YNR068CP53754 272 aa2.42□□□□□ -2.02
VPS13YLL040C PFA5Q03289 374 aa2.42□□□□□ -2.02
VPS13YLL040C YLR446WQ06204 433 aa2.42□□□□□ -2.02
VPS13YLL040C YLL056CQ12177 298 aa2.42□□□□□ -2.02
VPS13YLL040C TRM10Q12400 293 aa2.42□□□□□ -2.02
VPS13YLL040C CDC19P00549 500 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C HMG2P12684 1045 aa2.41□□□□□ -2.02
VPS13YLL040C FBA1P14540 359 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C RDS2P19541 446 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C RET1P22276 1149 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C RRT12P25381 491 aa2.41□□□□□ -2.02
VPS13YLL040C SMY2P32909 740 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C YEL1P34225 687 aa2.41□□□□□ -2.02
VPS13YLL040C KAP104P38217 918 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C RPN3P40016 523 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C TGL3P40308 642 aa2.41□□□□□ -2.02
VPS13YLL040C CPR7P47103 393 aa2.41□□□□□ -2.02
VPS13YLL040C FPK1P53739 893 aa2.41□□□□□ -2.02
VPS13YLL040C OSH6Q02201 448 aa2.41□□□□□ -2.02
VPS13YLL040C SYO1Q07395 620 aa2.41□□□□□ -2.02
VPS13YLL040C NRT1Q08485 598 aa2.41□□□□□ -2.02
VPS13YLL040C YOR389WQ08912 624 aa2.41□□□□□ -2.02
VPS13YLL040C YDR056CQ12025 205 aa2.41□□□□□ -2.02
VPS13YLL040C HSF1P10961 833 aa2.41□□□□□ -2.02
VPS13YLL040C IST2P38250 946 aa2.41□□□□□ -2.02
VPS13YLL040C RSC8P43609 557 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C MET12P46151 657 aa2.41□□□□□ -2.02
VPS13YLL040C YGL176CP46945 554 aa2.41□□□□□ -2.02
VPS13YLL040C MNN11P46985 422 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C HEH2Q03281 663 aa2.41□□□□□ -2.02
VPS13YLL040C PSR2Q07949 397 aa2.41□□□□□ -2.02
VPS13YLL040C GYP1Q08484 637 aa2.41□□□□□ -2.02
VPS13YLL040C FKS1P38631 1876 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C CBF1P17106 351 aa2.41□□□□□ -2.02
VPS13YLL040C ZIP1P31111 875 aa2.41□□□□□ -2.02
VPS13YLL040C PHA2P32452 334 aa2.41□□□□□ -2.02
VPS13YLL040C IPI3P53877 555 aa2.41□□□□□ -2.02
VPS13YLL040C IRC15Q02733 499 aa2.41□□□□□ -2.02
VPS13YLL040C YOL075CQ08234 1294 aa2.41□□□□□ -2.02
VPS13YLL040C MSS18P08593 268 aa2.41□□□□□ -2.02
VPS13YLL040C TRX1P22217 103 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C POA1P38218 177 aa2.41□□□□□ -2.02
VPS13YLL040C SOP4P39543 234 aaPredicted RBP2.41□□□□□ -2.02
VPS13YLL040C TPA1P40032 644 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C BST1P43571 1029 aa2.41□□□□□ -2.02
VPS13YLL040C OSW7P43611 510 aa2.41□□□□□ -2.02
VPS13YLL040C YML6P51998 286 aa2.41□□□□□ -2.02
VPS13YLL040C TOF2Q02208 771 aa2.41□□□□□ -2.02
VPS13YLL040C YDR514CQ04408 483 aa2.41□□□□□ -2.02
VPS13YLL040C LOT6Q07923 191 aa2.41□□□□□ -2.02
VPS13YLL040C RPS9AO13516 197 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C PHR1P05066 565 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
VPS13YLL040C TRM1P15565 570 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C MUD1P32605 298 aaKnown RBP2.41□□□□□ -2.02
VPS13YLL040C TYE7P33122 291 aaPredicted RBP2.41□□□□□ -2.02
VPS13YLL040C ROT2P38138 954 aa2.41□□□□□ -2.02
VPS13YLL040C PIK1P39104 1066 aa2.41□□□□□ -2.02
VPS13YLL040C YEN1P40028 759 aa2.41□□□□□ -2.02
VPS13YLL040C VHR2P40041 505 aa2.41□□□□□ -2.02
VPS13YLL040C YGR117CP53270 476 aa2.41□□□□□ -2.02
VPS13YLL040C BUD32P53323 261 aa2.41□□□□□ -2.02
VPS13YLL040C CDC123Q05791 360 aa2.41□□□□□ -2.02
VPS13YLL040C ECM38Q05902 660 aaPredicted RBP2.41□□□□□ -2.02
VPS13YLL040C ARO10Q06408 635 aa2.41□□□□□ -2.02
VPS13YLL040C YPR196WQ06595 470 aa2.41□□□□□ -2.02
VPS13YLL040C RGR1P19263 1082 aa2.41□□□□□ -2.02
VPS13YLL040C MDL2P33311 773 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms