RNA–Protein interactions for RNA: YJR057W

CDC8, Transcript of Thymidylate and uridylate kinase, yeastyeast

Gene CDC8, Length 651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC8YJR057W FRE7Q12333 620 aa4.52□□□□□ -1.69
CDC8YJR057W RPS21AP0C0V8 87 aaKnown RBP4.51□□□□□ -1.69
CDC8YJR057W AQY1P0CD91 305 aa4.51□□□□□ -1.69
CDC8YJR057W CDC26P14724 124 aa4.51□□□□□ -1.69
CDC8YJR057W ACO1P19414 778 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
CDC8YJR057W HOP1P20050 605 aa4.51□□□□□ -1.69
CDC8YJR057W TSR4P25040 408 aa4.51□□□□□ -1.69
CDC8YJR057W MRPL9P31334 269 aa4.51□□□□□ -1.69
CDC8YJR057W BEM3P32873 1128 aa4.51□□□□□ -1.69
CDC8YJR057W YDL183CP48569 320 aa4.51□□□□□ -1.69
CDC8YJR057W UTP14Q04500 899 aaKnown RBP4.51□□□□□ -1.69
CDC8YJR057W ARR3Q06598 404 aa4.51□□□□□ -1.69
CDC8YJR057W YPL216WQ08964 1102 aa4.51□□□□□ -1.69
CDC8YJR057W TY4B-HP0C2J7 1802 aa4.51□□□□□ -1.69
CDC8YJR057W TY4B-JP47024 1803 aa4.51□□□□□ -1.69
CDC8YJR057W HEM1P09950 548 aaPredicted RBP4.5□□□□□ -1.69
CDC8YJR057W WHI2P12611 486 aa4.5□□□□□ -1.69
CDC8YJR057W MF(ALPHA)2P32435 120 aa4.5□□□□□ -1.69
CDC8YJR057W RPC34P32910 317 aa4.5□□□□□ -1.69
CDC8YJR057W DHR2P36009 735 aaPredicted RBP4.5□□□□□ -1.69
CDC8YJR057W VID28P40547 921 aa4.5□□□□□ -1.69
CDC8YJR057W GFD1Q04839 188 aaKnown RBP4.5□□□□□ -1.69
CDC8YJR057W CIR2Q08822 631 aa4.5□□□□□ -1.69
CDC8YJR057W YTM1Q12024 460 aaPredicted RBP4.5□□□□□ -1.69
CDC8YJR057W YRF1-2P40105 1681 aa4.5□□□□□ -1.69
CDC8YJR057W RSF2P46974 1380 aa4.5□□□□□ -1.69
CDC8YJR057W NUP145P49687 1317 aa4.49□□□□□ -1.69
CDC8YJR057W OSM1P21375 501 aaKnown RBP4.49□□□□□ -1.69
CDC8YJR057W EHT1P38295 451 aa4.49□□□□□ -1.69
CDC8YJR057W OAF1P39720 1047 aaPredicted RBP4.49□□□□□ -1.69
CDC8YJR057W YEL025CP39991 1188 aa4.49□□□□□ -1.69
CDC8YJR057W LRO1P40345 661 aa4.49□□□□□ -1.69
CDC8YJR057W SNO3P43544 222 aa4.49□□□□□ -1.69
CDC8YJR057W NMD5P46970 1048 aa4.49□□□□□ -1.69
CDC8YJR057W MNN11P46985 422 aaKnown RBP4.49□□□□□ -1.69
CDC8YJR057W ADE16P54113 591 aaKnown RBP4.49□□□□□ -1.69
CDC8YJR057W ERG13P54839 491 aaKnown RBP4.49□□□□□ -1.69
CDC8YJR057W YCG1Q06680 1035 aa4.49□□□□□ -1.69
CDC8YJR057W GEP3Q08622 556 aa4.49□□□□□ -1.69
CDC8YJR057W EDE1P34216 1381 aa4.49□□□□□ -1.69
CDC8YJR057W APC1P53886 1748 aa4.49□□□□□ -1.69
CDC8YJR057W CAP1P28495 268 aaKnown RBP4.48□□□□□ -1.69
CDC8YJR057W YKL133CP36066 463 aa4.48□□□□□ -1.69
CDC8YJR057W DID4P36108 232 aa4.48□□□□□ -1.69
CDC8YJR057W YPT10P38146 199 aa4.48□□□□□ -1.69
CDC8YJR057W YHR033WP38690 423 aa4.48□□□□□ -1.69
CDC8YJR057W NMD2P38798 1089 aaKnown RBP4.48□□□□□ -1.69
CDC8YJR057W SPC97P38863 823 aa4.48□□□□□ -1.69
CDC8YJR057W YFR016CP43597 1233 aaKnown RBP4.48□□□□□ -1.69
CDC8YJR057W GPG1P53130 126 aa4.48□□□□□ -1.69
CDC8YJR057W UME1Q03010 460 aa4.48□□□□□ -1.69
CDC8YJR057W CSI1Q04368 295 aa4.48□□□□□ -1.69
CDC8YJR057W YOL057WQ08225 711 aa4.48□□□□□ -1.69
CDC8YJR057W AIM41Q12032 185 aa4.48□□□□□ -1.69
CDC8YJR057W RRP5Q05022 1729 aaKnown RBP4.48□□□□□ -1.69
CDC8YJR057W HMG2P12684 1045 aa4.47□□□□□ -1.69
CDC8YJR057W ECM32P32644 1121 aaKnown RBP4.47□□□□□ -1.69
CDC8YJR057W YNG2P38806 282 aaKnown RBP4.47□□□□□ -1.69
CDC8YJR057W EXO1P39875 702 aa4.47□□□□□ -1.69
CDC8YJR057W BST1P43571 1029 aa4.47□□□□□ -1.69
CDC8YJR057W YFL015CP43578 164 aa4.47□□□□□ -1.69
CDC8YJR057W SAP4P53036 818 aa4.47□□□□□ -1.69
CDC8YJR057W PTA1Q01329 785 aaPredicted RBP4.47□□□□□ -1.69
CDC8YJR057W USA1Q03714 838 aa4.47□□□□□ -1.69
CDC8YJR057W IMH1Q06704 911 aaKnown RBP4.47□□□□□ -1.69
CDC8YJR057W ALE1Q08548 619 aa4.47□□□□□ -1.69
CDC8YJR057W TGS1Q12052 315 aa4.47□□□□□ -1.69
CDC8YJR057W YIL177CP40434 1758 aa4.47□□□□□ -1.69
CDC8YJR057W YJL225CP40889 1758 aa4.47□□□□□ -1.69
CDC8YJR057W RPS19AP07280 144 aaKnown RBP4.46□□□□□ -1.7
CDC8YJR057W RPS19BP07281 144 aaPredicted RBP4.46□□□□□ -1.7
CDC8YJR057W LOT5P34234 306 aa4.46□□□□□ -1.7
CDC8YJR057W PMT3P47190 753 aa4.46□□□□□ -1.7
CDC8YJR057W ENP2P48234 707 aaKnown RBP4.46□□□□□ -1.7
CDC8YJR057W ZDS2P54786 942 aa4.46□□□□□ -1.7
CDC8YJR057W MRP7P12687 371 aa4.45□□□□□ -1.7
CDC8YJR057W RNR3P21672 869 aaKnown RBP4.45□□□□□ -1.7
CDC8YJR057W RAD24P32641 659 aa4.45□□□□□ -1.7
CDC8YJR057W CCL1P37366 393 aa4.45□□□□□ -1.7
CDC8YJR057W DOT5P40553 215 aa4.45□□□□□ -1.7
CDC8YJR057W GPP1P41277 250 aaKnown RBP4.45□□□□□ -1.7
CDC8YJR057W IRC8P47046 822 aa4.45□□□□□ -1.7
CDC8YJR057W YJL043WP47053 257 aa4.45□□□□□ -1.7
CDC8YJR057W TDA9Q04545 1251 aa4.45□□□□□ -1.7
CDC8YJR057W URB1P34241 1764 aaKnown RBP4.45□□□□□ -1.7
CDC8YJR057W LYS2P07702 1392 aa4.44□□□□□ -1.7
CDC8YJR057W GSY2P27472 705 aa4.44□□□□□ -1.7
CDC8YJR057W SWC3P31376 625 aa4.44□□□□□ -1.7
CDC8YJR057W BRN1P38170 754 aa4.44□□□□□ -1.7
CDC8YJR057W MNT3P40549 630 aa4.44□□□□□ -1.7
CDC8YJR057W OPT1P40897 799 aa4.44□□□□□ -1.7
CDC8YJR057W MEP2P41948 499 aa4.44□□□□□ -1.7
CDC8YJR057W YJR142WP47173 342 aa4.44□□□□□ -1.7
CDC8YJR057W FKS3Q04952 1785 aa4.44□□□□□ -1.7
CDC8YJR057W VPS33P20795 691 aa4.43□□□□□ -1.7
CDC8YJR057W DGR2P32330 852 aa4.43□□□□□ -1.7
CDC8YJR057W RMA1P36001 430 aaKnown RBP4.43□□□□□ -1.7
CDC8YJR057W YJL193WP39542 402 aa4.43□□□□□ -1.7
CDC8YJR057W TDA10P42938 290 aa4.43□□□□□ -1.7
CDC8YJR057W RSC9Q03124 581 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms