RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	NCP1	P16603	691 aa	Known RBP	3.59	□□□□□ -1.83
YPS6	YIR039C	TPM1	P17536	199 aa	Known RBP	3.59	□□□□□ -1.83
YPS6	YIR039C	MBR1	P23493	339 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	RER1	P25560	188 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	MGM1	P32266	881 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	PRX1	P34227	261 aa	Known RBP	3.59	□□□□□ -1.83
YPS6	YIR039C	YHR033W	P38690	423 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	YHR112C	P38716	378 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	PUG1	P40100	303 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	YNL195C	P40168	261 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	RAD26	P40352	1085 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	HOS4	P40480	1083 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	SMK1	P41808	388 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	PEF1	P53238	335 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	VPS62	P53285	467 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	YMR018W	Q04364	514 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	TRI1	Q05024	226 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	TFC6	Q06339	672 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	PEX19	Q07418	342 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	NOP12	Q08208	459 aa	Known RBP	3.59	□□□□□ -1.83
YPS6	YIR039C	SGO1	Q08490	590 aa		3.59	□□□□□ -1.83
YPS6	YIR039C	POM152	P39685	1337 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	CPA2	P03965	1118 aa	Known RBP	3.59	□□□□□ -1.84
YPS6	YIR039C	SIR1	P21691	654 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	OPI1	P21957	404 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	MCM3	P24279	971 aa	Known RBP	3.59	□□□□□ -1.84
YPS6	YIR039C	FRD1	P32614	470 aa	Known RBP	3.59	□□□□□ -1.84
YPS6	YIR039C	RPT3	P33298	428 aa	Known RBP	3.59	□□□□□ -1.84
YPS6	YIR039C	APT2	P36973	181 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	PPE1	P38796	400 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	PLB1	P39105	664 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	SPO22	P40511	975 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	AIM21	P40563	679 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	PXA1	P41909	870 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	BIT61	P47041	543 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	MRPL13	Q02204	264 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	PPN1	Q04119	674 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	INM2	Q05533	292 aa		3.59	□□□□□ -1.84
YPS6	YIR039C	PMD1	P32634	1753 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	ERG20	P08524	352 aa	Known RBP	3.58	□□□□□ -1.84
YPS6	YIR039C	HMG2	P12684	1045 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	FRS2	P15625	503 aa	Known RBP	3.58	□□□□□ -1.84
YPS6	YIR039C	RNR1	P21524	888 aa	Known RBP	3.58	□□□□□ -1.84
YPS6	YIR039C	UBC1	P21734	215 aa	Known RBP	3.58	□□□□□ -1.84
YPS6	YIR039C	RDS1	P25611	832 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	CWH43	P25618	953 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	PEP3	P27801	918 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	PRE4	P30657	266 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	RKM3	P38222	552 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	OSH3	P38713	996 aa	Known RBP	3.58	□□□□□ -1.84
YPS6	YIR039C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
YPS6	YIR039C	TMA108	P40462	946 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	RSM25	P40496	264 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	PRM2	P40534	656 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	EPL1	P43572	832 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	IRC8	P47046	822 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	RPT4	P53549	437 aa	Known RBP	3.58	□□□□□ -1.84
YPS6	YIR039C	VBA4	Q04602	768 aa	Known RBP	3.58	□□□□□ -1.84
YPS6	YIR039C	YLR224W	Q05947	369 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	MED1	Q12321	566 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	NPC2	Q12408	173 aa		3.58	□□□□□ -1.84
YPS6	YIR039C	URA3	P03962	267 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	CHO2	P05374	869 aa	Known RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	COQ1	P18900	473 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	ARG1	P22768	420 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	ERG6	P25087	383 aa	Known RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	SLC1	P33333	303 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	RMA1	P36001	430 aa	Known RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	YBR138C	P38277	524 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	SPL2	P38839	148 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	NOP9	P47077	666 aa	Known RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	MCM6	P53091	1017 aa	Known RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	RRT6	P53117	311 aa	Predicted RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	COX18	P53239	316 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	TEX1	P53851	422 aa	Known RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	IRC4	Q03036	179 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	NRG1	Q03125	231 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	VID22	Q05934	901 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	IRC3	Q06683	689 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	IWR1	Q07532	353 aa	Predicted RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	TAH18	Q12181	623 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	TRM11	Q12463	433 aa		3.57	□□□□□ -1.84
YPS6	YIR039C	HRP1	Q99383	534 aa	Known RBP	3.57	□□□□□ -1.84
YPS6	YIR039C	FAS2	P19097	1887 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	INH1	P01097	85 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	HSP82	P02829	709 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	SNF1	P06782	633 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	NUC1	P08466	329 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	MIS1	P09440	975 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	MATALPHA2	P0CY08	210 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	HMLALPHA2	P0CY09	210 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	POL3	P15436	1097 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	PRP22	P24384	1145 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	CLB4	P24871	460 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	LST4	P34239	828 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	PTK1	P36002	662 aa	Predicted RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	MAL33	P38157	468 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	CDS1	P38221	457 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	RPP1	P38786	293 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	AXL2	P38928	823 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms