RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W YIR014WP40570 242 aa2.35□□□□□ -2.03
BRP1YGL007W GYP8P43570 497 aa2.35□□□□□ -2.03
BRP1YGL007W VTC2P43585 828 aa2.35□□□□□ -2.03
BRP1YGL007W NPA3P47122 385 aa2.35□□□□□ -2.03
BRP1YGL007W PEX14P53112 341 aa2.35□□□□□ -2.03
BRP1YGL007W CUE3P53137 624 aaKnown RBP2.35□□□□□ -2.03
BRP1YGL007W TAM41P53230 385 aa2.35□□□□□ -2.03
BRP1YGL007W YGR283CP53336 341 aaPredicted RBP2.35□□□□□ -2.03
BRP1YGL007W VPS20Q04272 221 aa2.35□□□□□ -2.03
BRP1YGL007W YDR338CQ05497 695 aa2.35□□□□□ -2.03
BRP1YGL007W CUR1Q06469 252 aa2.35□□□□□ -2.03
BRP1YGL007W YLH47Q06493 454 aa2.35□□□□□ -2.03
BRP1YGL007W YDL057WQ07379 328 aa2.35□□□□□ -2.03
BRP1YGL007W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
BRP1YGL007W GNT1Q12096 491 aa2.35□□□□□ -2.03
BRP1YGL007W NBL1Q3E7Y6 73 aa2.35□□□□□ -2.03
BRP1YGL007W TOR1P35169 2470 aa2.35□□□□□ -2.03
BRP1YGL007W SEN1Q00416 2231 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W PCK1P10963 549 aa2.34□□□□□ -2.03
BRP1YGL007W APA1P16550 321 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W PFK1P16861 987 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W SEC21P32074 935 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W PRP19P32523 503 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W YSC83P32792 385 aa2.34□□□□□ -2.03
BRP1YGL007W SKG6P32900 734 aaPredicted RBP2.34□□□□□ -2.03
BRP1YGL007W CSE2P33308 149 aa2.34□□□□□ -2.03
BRP1YGL007W YEL1P34225 687 aa2.34□□□□□ -2.03
BRP1YGL007W PRX1P34227 261 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W CCL1P37366 393 aa2.34□□□□□ -2.03
BRP1YGL007W RFT1P38206 574 aaPredicted RBP2.34□□□□□ -2.03
BRP1YGL007W VID24P38263 362 aa2.34□□□□□ -2.03
BRP1YGL007W CKB2P38930 258 aa2.34□□□□□ -2.03
BRP1YGL007W SNF7P39929 240 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W SIT1P39980 628 aa2.34□□□□□ -2.03
BRP1YGL007W MMF1P40185 145 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W LAM5P43560 674 aa2.34□□□□□ -2.03
BRP1YGL007W CAF16P43569 289 aa2.34□□□□□ -2.03
BRP1YGL007W ORC5P50874 479 aa2.34□□□□□ -2.03
BRP1YGL007W SHE10P53075 577 aa2.34□□□□□ -2.03
BRP1YGL007W VID30P53076 958 aa2.34□□□□□ -2.03
BRP1YGL007W CUL3P53202 744 aa2.34□□□□□ -2.03
BRP1YGL007W PIL1P53252 339 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W SEC5P89102 971 aa2.34□□□□□ -2.03
BRP1YGL007W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
BRP1YGL007W MET14Q02196 202 aa2.34□□□□□ -2.03
BRP1YGL007W VTC3Q02725 835 aa2.34□□□□□ -2.03
BRP1YGL007W TRS130Q03660 1102 aa2.34□□□□□ -2.03
BRP1YGL007W LCD1Q04377 747 aa2.34□□□□□ -2.03
BRP1YGL007W HRQ1Q05549 1077 aa2.34□□□□□ -2.03
BRP1YGL007W ATG33Q06485 197 aa2.34□□□□□ -2.03
BRP1YGL007W MRI1Q06489 411 aaKnown RBP2.34□□□□□ -2.03
BRP1YGL007W OSW2Q12202 724 aa2.34□□□□□ -2.03
BRP1YGL007W SVS1Q12254 260 aa2.34□□□□□ -2.03
BRP1YGL007W MOT1P32333 1867 aa2.33□□□□□ -2.04
BRP1YGL007W HIS4P00815 799 aaKnown RBP2.33□□□□□ -2.04
BRP1YGL007W ATP4P05626 244 aa2.33□□□□□ -2.04
BRP1YGL007W DAL7P21826 554 aa2.33□□□□□ -2.04
BRP1YGL007W RPC53P25441 422 aa2.33□□□□□ -2.04
BRP1YGL007W PPZ1P26570 692 aa2.33□□□□□ -2.04
BRP1YGL007W PRR1P28708 518 aa2.33□□□□□ -2.04
BRP1YGL007W BMH1P29311 267 aaKnown RBP2.33□□□□□ -2.04
BRP1YGL007W PEX2P32800 271 aa2.33□□□□□ -2.04
BRP1YGL007W REC104P33323 182 aa2.33□□□□□ -2.04
BRP1YGL007W HMT1P38074 348 aa2.33□□□□□ -2.04
BRP1YGL007W KTR4P38131 464 aa2.33□□□□□ -2.04
BRP1YGL007W PPS1P38148 807 aa2.33□□□□□ -2.04
BRP1YGL007W UBP13P38187 747 aa2.33□□□□□ -2.04
BRP1YGL007W MMS4P38257 691 aa2.33□□□□□ -2.04
BRP1YGL007W PCM1P38628 557 aaKnown RBP2.33□□□□□ -2.04
BRP1YGL007W ERP2P39704 215 aa2.33□□□□□ -2.04
BRP1YGL007W OAF1P39720 1047 aaPredicted RBP2.33□□□□□ -2.04
BRP1YGL007W NPP2P39997 493 aa2.33□□□□□ -2.04
BRP1YGL007W GPP2P40106 250 aaKnown RBP2.33□□□□□ -2.04
BRP1YGL007W YIR016WP40572 265 aa2.33□□□□□ -2.04
BRP1YGL007W LCB2P40970 561 aa2.33□□□□□ -2.04
BRP1YGL007W MAF1P41910 395 aa2.33□□□□□ -2.04
BRP1YGL007W QRI1P43123 477 aaKnown RBP2.33□□□□□ -2.04
BRP1YGL007W STU2P46675 888 aa2.33□□□□□ -2.04
BRP1YGL007W POL31P46957 487 aa2.33□□□□□ -2.04
BRP1YGL007W STB4P50104 949 aa2.33□□□□□ -2.04
BRP1YGL007W ALT2P52892 507 aa2.33□□□□□ -2.04
BRP1YGL007W TOF1P53840 1238 aa2.33□□□□□ -2.04
BRP1YGL007W COG8Q04632 607 aa2.33□□□□□ -2.04
BRP1YGL007W RSC3Q06639 885 aa2.33□□□□□ -2.04
BRP1YGL007W SGO1Q08490 590 aa2.33□□□□□ -2.04
BRP1YGL007W TCO89Q08921 799 aa2.33□□□□□ -2.04
BRP1YGL007W PKH2Q12236 1081 aaKnown RBP2.33□□□□□ -2.04
BRP1YGL007W BEM2P39960 2167 aaKnown RBP2.33□□□□□ -2.04
BRP1YGL007W UBR2Q07963 1872 aa2.33□□□□□ -2.04
BRP1YGL007W FMP27Q06179 2628 aa2.32□□□□□ -2.04
BRP1YGL007W TPK1P06244 397 aa2.32□□□□□ -2.04
BRP1YGL007W HAP2P06774 265 aa2.32□□□□□ -2.04
BRP1YGL007W SNF1P06782 633 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W ATP1P07251 545 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W SPE1P08432 466 aa2.32□□□□□ -2.04
BRP1YGL007W RPL4AP10664 362 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W BIK1P11709 440 aa2.32□□□□□ -2.04
BRP1YGL007W HMG1P12683 1054 aa2.32□□□□□ -2.04
BRP1YGL007W APE1P14904 514 aa2.32□□□□□ -2.04
BRP1YGL007W MIH1P23748 554 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms