RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C APN2P38207 520 aa3.24□□□□□ -1.89
VPS3YDR495C YHR054CP38780 354 aa3.24□□□□□ -1.89
VPS3YDR495C JHD1P40034 492 aa3.24□□□□□ -1.89
VPS3YDR495C MET18P40469 1032 aa3.24□□□□□ -1.89
VPS3YDR495C TED1P40533 473 aa3.24□□□□□ -1.89
VPS3YDR495C IST3P40565 148 aaPredicted RBP3.24□□□□□ -1.89
VPS3YDR495C ZAP1P47043 880 aa3.24□□□□□ -1.89
VPS3YDR495C TCB2P48231 1178 aa3.24□□□□□ -1.89
VPS3YDR495C IMA1P53051 589 aa3.24□□□□□ -1.89
VPS3YDR495C RRN5Q02983 363 aa3.24□□□□□ -1.89
VPS3YDR495C RCR2Q03446 210 aaKnown RBP3.24□□□□□ -1.89
VPS3YDR495C TY2A-DR2Q03483 438 aa3.24□□□□□ -1.89
VPS3YDR495C EFR3Q03653 782 aaKnown RBP3.24□□□□□ -1.89
VPS3YDR495C SSL1Q04673 461 aaPredicted RBP3.24□□□□□ -1.89
VPS3YDR495C ASM4Q05166 528 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-BQ12260 438 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-OR2Q12293 438 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-DR1Q12392 438 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-OR1Q12439 438 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-DR3Q99303 438 aa3.24□□□□□ -1.89
VPS3YDR495C YML002WP0CF17 737 aa3.23□□□□□ -1.89
VPS3YDR495C SNF5P18480 905 aa3.23□□□□□ -1.89
VPS3YDR495C PHO84P25297 587 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C YSC84P32793 468 aa3.23□□□□□ -1.89
VPS3YDR495C ASH1P34233 588 aa3.23□□□□□ -1.89
VPS3YDR495C MIP6P38760 659 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C BFR1P38934 470 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
VPS3YDR495C ARB1P40024 610 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C LEM3P42838 414 aa3.23□□□□□ -1.89
VPS3YDR495C DUS1P53759 423 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C CWC21Q03375 135 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C ROY1Q04847 553 aa3.23□□□□□ -1.89
VPS3YDR495C DON1Q05610 365 aa3.23□□□□□ -1.89
VPS3YDR495C CRD1Q07560 283 aa3.23□□□□□ -1.89
VPS3YDR495C RCL1Q08096 367 aaPredicted RBP3.23□□□□□ -1.89
VPS3YDR495C ELG1Q12050 791 aa3.23□□□□□ -1.89
VPS3YDR495C RPN5Q12250 445 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C RPB2P08518 1224 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C KAR3P17119 729 aa3.23□□□□□ -1.89
VPS3YDR495C ERG8P24521 451 aa3.23□□□□□ -1.89
VPS3YDR495C RPS7AP26786 190 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C UBP11P36026 717 aa3.23□□□□□ -1.89
VPS3YDR495C HEL1P36113 551 aa3.23□□□□□ -1.89
VPS3YDR495C ALY1P36117 915 aa3.23□□□□□ -1.89
VPS3YDR495C ADH5P38113 351 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C PCH2P38126 564 aa3.23□□□□□ -1.89
VPS3YDR495C PRE3P38624 215 aa3.23□□□□□ -1.89
VPS3YDR495C GLO1P50107 326 aa3.23□□□□□ -1.89
VPS3YDR495C TEL2P53038 688 aa3.23□□□□□ -1.89
VPS3YDR495C NCS6P53088 359 aa3.23□□□□□ -1.89
VPS3YDR495C LSC2P53312 427 aa3.23□□□□□ -1.89
VPS3YDR495C HST3P53687 447 aa3.23□□□□□ -1.89
VPS3YDR495C DOT1Q04089 582 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C THI22Q06490 572 aa3.23□□□□□ -1.89
VPS3YDR495C LUC7Q07508 261 aaPredicted RBP3.23□□□□□ -1.89
VPS3YDR495C HRK1Q08732 759 aaKnown RBP3.23□□□□□ -1.89
VPS3YDR495C CTF3Q12748 733 aa3.23□□□□□ -1.89
VPS3YDR495C CTT1P06115 562 aa3.22□□□□□ -1.89
VPS3YDR495C PAP1P29468 568 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C MRX1P40050 688 aa3.22□□□□□ -1.89
VPS3YDR495C RRT14P40470 206 aa3.22□□□□□ -1.89
VPS3YDR495C MKT1P40850 830 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C EPL1P43572 832 aa3.22□□□□□ -1.89
VPS3YDR495C SSY5P47002 699 aa3.22□□□□□ -1.89
VPS3YDR495C TAF4P50105 388 aa3.22□□□□□ -1.89
VPS3YDR495C NCE103P53615 221 aa3.22□□□□□ -1.89
VPS3YDR495C PRO2P54885 456 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C SDH1Q00711 640 aa3.22□□□□□ -1.89
VPS3YDR495C TOF2Q02208 771 aa3.22□□□□□ -1.89
VPS3YDR495C TPP1Q03796 238 aa3.22□□□□□ -1.89
VPS3YDR495C ARX1Q03862 593 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C YAP6Q03935 383 aa3.22□□□□□ -1.89
VPS3YDR495C STP3Q05937 343 aa3.22□□□□□ -1.89
VPS3YDR495C RIX7Q07844 837 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C MAL33P38157 468 aa3.22□□□□□ -1.89
VPS3YDR495C VPS45P38932 577 aa3.22□□□□□ -1.89
VPS3YDR495C RGI2P40188 164 aa3.22□□□□□ -1.89
VPS3YDR495C SGN1P40561 250 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
VPS3YDR495C TMA16Q08687 178 aa3.22□□□□□ -1.89
VPS3YDR495C PLP2Q12017 286 aa3.22□□□□□ -1.89
VPS3YDR495C RTC5Q12108 567 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C SUL2Q12325 893 aa3.22□□□□□ -1.89
VPS3YDR495C ISN1Q99312 450 aa3.22□□□□□ -1.89
VPS3YDR495C ATP2P00830 511 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C IME1P21190 360 aa3.22□□□□□ -1.89
VPS3YDR495C CWH43P25618 953 aa3.22□□□□□ -1.89
VPS3YDR495C TRK2P28584 889 aa3.22□□□□□ -1.89
VPS3YDR495C DAD2P36162 133 aa3.22□□□□□ -1.89
VPS3YDR495C POL12P38121 705 aaPredicted RBP3.22□□□□□ -1.89
VPS3YDR495C ECM21P38167 1117 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C HSM3P38348 480 aa3.22□□□□□ -1.89
VPS3YDR495C CTM1P38818 585 aa3.22□□□□□ -1.89
VPS3YDR495C MTR3P48240 250 aaPredicted RBP3.22□□□□□ -1.89
VPS3YDR495C RAI1P53063 387 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
VPS3YDR495C ABZ2Q03266 374 aa3.22□□□□□ -1.89
VPS3YDR495C RCO1Q04779 684 aa3.22□□□□□ -1.89
VPS3YDR495C DBP9Q06218 594 aaKnown RBP3.22□□□□□ -1.89
VPS3YDR495C CLP1Q08685 445 aaPredicted RBP3.22□□□□□ -1.89
VPS3YDR495C PFK27Q12471 397 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms