RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C TAH11P47112 604 aa6.15□□□□□ -1.43
VPS72YDR485C TEL2P53038 688 aa6.15□□□□□ -1.43
VPS72YDR485C TAM41P53230 385 aa6.15□□□□□ -1.43
VPS72YDR485C YLH47Q06493 454 aa6.15□□□□□ -1.43
VPS72YDR485C CDA1Q06702 301 aa6.15□□□□□ -1.43
VPS72YDR485C SPE3Q12074 293 aaKnown RBP6.15□□□□□ -1.43
VPS72YDR485C NBP2Q12163 236 aa6.15□□□□□ -1.43
VPS72YDR485C BMT6Q12291 365 aa6.15□□□□□ -1.43
VPS72YDR485C VCX1Q99385 411 aa6.15□□□□□ -1.43
VPS72YDR485C HMG2P12684 1045 aa6.14□□□□□ -1.43
VPS72YDR485C HEL1P36113 551 aa6.14□□□□□ -1.43
VPS72YDR485C YNL195CP40168 261 aa6.14□□□□□ -1.43
VPS72YDR485C IST3P40565 148 aaPredicted RBP6.14□□□□□ -1.43
VPS72YDR485C HST1P53685 503 aa6.14□□□□□ -1.43
VPS72YDR485C RAD33Q04231 177 aa6.14□□□□□ -1.43
VPS72YDR485C SWA2Q06677 668 aa6.14□□□□□ -1.43
VPS72YDR485C AIM6Q07716 390 aa6.14□□□□□ -1.43
VPS72YDR485C COQ4O13525 335 aa6.14□□□□□ -1.43
VPS72YDR485C PWP1P21304 576 aaKnown RBP6.14□□□□□ -1.43
VPS72YDR485C SRP101P32916 621 aa6.14□□□□□ -1.43
VPS72YDR485C MPT5P39016 859 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
VPS72YDR485C TRS31Q03337 283 aa6.14□□□□□ -1.43
VPS72YDR485C UPC2Q12151 913 aa6.14□□□□□ -1.43
VPS72YDR485C PHM7Q12252 991 aa6.14□□□□□ -1.43
VPS72YDR485C ADH5P38113 351 aaKnown RBP6.13□□□□□ -1.43
VPS72YDR485C TIF4631P39935 952 aaKnown RBP6.13□□□□□ -1.43
VPS72YDR485C AAD10P47182 288 aa6.13□□□□□ -1.43
VPS72YDR485C VPS4P52917 437 aa6.13□□□□□ -1.43
VPS72YDR485C ORC4P54791 529 aa6.13□□□□□ -1.43
VPS72YDR485C OPT2Q06593 877 aa6.13□□□□□ -1.43
VPS72YDR485C SYT1Q06836 1226 aa6.13□□□□□ -1.43
VPS72YDR485C PML1Q07930 204 aaPredicted RBP6.13□□□□□ -1.43
VPS72YDR485C TY1A-BLQ12266 440 aa6.13□□□□□ -1.43
VPS72YDR485C YRF1-4O13559 1382 aa6.13□□□□□ -1.43
VPS72YDR485C PYC1P11154 1178 aaKnown RBP6.13□□□□□ -1.43
VPS72YDR485C ERV1P27882 189 aa6.13□□□□□ -1.43
VPS72YDR485C PRP45P28004 379 aaPredicted RBP6.13□□□□□ -1.43
VPS72YDR485C ALY1P36117 915 aa6.13□□□□□ -1.43
VPS72YDR485C APE3P37302 537 aaKnown RBP6.13□□□□□ -1.43
VPS72YDR485C PCH2P38126 564 aa6.13□□□□□ -1.43
VPS72YDR485C SLN1P39928 1220 aaPredicted RBP6.13□□□□□ -1.43
VPS72YDR485C GLO1P50107 326 aa6.13□□□□□ -1.43
VPS72YDR485C YAP6Q03935 383 aa6.13□□□□□ -1.43
VPS72YDR485C MDH1P17505 334 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
VPS72YDR485C DAL80P26343 269 aa6.12□□□□□ -1.43
VPS72YDR485C TRK2P28584 889 aa6.12□□□□□ -1.43
VPS72YDR485C YBL029WP38201 376 aa6.12□□□□□ -1.43
VPS72YDR485C MRX1P40050 688 aa6.12□□□□□ -1.43
VPS72YDR485C OSW5P40219 148 aa6.12□□□□□ -1.43
VPS72YDR485C SSU1P41930 458 aa6.12□□□□□ -1.43
VPS72YDR485C LYS4P49367 693 aaPredicted RBP6.12□□□□□ -1.43
VPS72YDR485C OGG1P53397 376 aaPredicted RBP6.12□□□□□ -1.43
VPS72YDR485C STP3Q05937 343 aa6.12□□□□□ -1.43
VPS72YDR485C YDL073WQ07454 984 aa6.12□□□□□ -1.43
VPS72YDR485C RIX7Q07844 837 aaKnown RBP6.12□□□□□ -1.43
VPS72YDR485C YMR084WA2P2R3 262 aa6.11□□□□□ -1.43
VPS72YDR485C PDC5P16467 563 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C ADE2P21264 571 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C RPS7AP26786 190 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C IME2P32581 645 aa6.11□□□□□ -1.43
VPS72YDR485C STB5P38699 743 aa6.11□□□□□ -1.43
VPS72YDR485C YHR097CP38809 366 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C CTF8P38877 133 aa6.11□□□□□ -1.43
VPS72YDR485C SAK1P38990 1142 aa6.11□□□□□ -1.43
VPS72YDR485C BUD16P39988 312 aa6.11□□□□□ -1.43
VPS72YDR485C SGN1P40561 250 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
VPS72YDR485C PXA1P41909 870 aa6.11□□□□□ -1.43
VPS72YDR485C SQS1P53866 767 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C ATG21Q02887 496 aa6.11□□□□□ -1.43
VPS72YDR485C MUB1Q03162 620 aa6.11□□□□□ -1.43
VPS72YDR485C HMO1Q03973 246 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C PHO92Q06390 306 aa6.11□□□□□ -1.43
VPS72YDR485C MLH2Q07980 695 aa6.11□□□□□ -1.43
VPS72YDR485C TMA16Q08687 178 aa6.11□□□□□ -1.43
VPS72YDR485C BMS1Q08965 1183 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C YPL272CQ08984 517 aa6.11□□□□□ -1.43
VPS72YDR485C RPS4AP0CX35 261 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C RPS4BP0CX36 261 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C YCR051WP25631 222 aa6.11□□□□□ -1.43
VPS72YDR485C CST26P38226 397 aa6.11□□□□□ -1.43
VPS72YDR485C CRG1P38892 291 aaRIP-Chip data6.11□□□□□ -1.43not detected
VPS72YDR485C JHD1P40034 492 aa6.11□□□□□ -1.43
VPS72YDR485C BIT61P47041 543 aa6.11□□□□□ -1.43
VPS72YDR485C MTR3P48240 250 aaPredicted RBP6.11□□□□□ -1.43
VPS72YDR485C EOS1P53938 366 aa6.11□□□□□ -1.43
VPS72YDR485C RPC11Q04307 110 aaPredicted RBP6.11□□□□□ -1.43
VPS72YDR485C ROY1Q04847 553 aa6.11□□□□□ -1.43
VPS72YDR485C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
VPS72YDR485C RPN5Q12250 445 aaKnown RBP6.11□□□□□ -1.43
VPS72YDR485C DBP3P20447 523 aaKnown RBP6.1□□□□□ -1.43
VPS72YDR485C SUI2P20459 304 aaKnown RBP6.1□□□□□ -1.43
VPS72YDR485C PFA3P42836 336 aa6.1□□□□□ -1.43
VPS72YDR485C LCL3P53153 274 aa6.1□□□□□ -1.43
VPS72YDR485C CUL3P53202 744 aa6.1□□□□□ -1.43
VPS72YDR485C MUS81Q04149 632 aaPredicted RBP6.1□□□□□ -1.43
VPS72YDR485C APL4Q12028 832 aa6.1□□□□□ -1.43
VPS72YDR485C SNT1P25357 1226 aa6.1□□□□□ -1.43
VPS72YDR485C SPB1P25582 841 aaPredicted RBP6.1□□□□□ -1.43
VPS72YDR485C CCT6P39079 546 aa6.1□□□□□ -1.43
VPS72YDR485C VFA1P40080 203 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms