RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W MTD1Q02046 320 aaKnown RBP5.95□□□□□ -1.46
VMS1YDR049W ECM7Q06200 448 aa5.95□□□□□ -1.46
VMS1YDR049W DIB1Q06819 143 aaPredicted RBP5.95□□□□□ -1.46
VMS1YDR049W RCN2Q12044 265 aa5.95□□□□□ -1.46
VMS1YDR049W GNT1Q12096 491 aa5.95□□□□□ -1.46
VMS1YDR049W NMD4Q12129 218 aa5.95□□□□□ -1.46
VMS1YDR049W RBD2Q12270 262 aa5.95□□□□□ -1.46
VMS1YDR049W YCR051WP25631 222 aa5.94□□□□□ -1.46
VMS1YDR049W CUE2P36075 443 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W RGD1P38339 666 aa5.94□□□□□ -1.46
VMS1YDR049W MSC7P38694 644 aa5.94□□□□□ -1.46
VMS1YDR049W YHR054CP38780 354 aa5.94□□□□□ -1.46
VMS1YDR049W YIL089WP40500 205 aa5.94□□□□□ -1.46
VMS1YDR049W ARC1P46672 376 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W ASE1P50275 885 aa5.94□□□□□ -1.46
VMS1YDR049W SMA1Q02651 245 aa5.94□□□□□ -1.46
VMS1YDR049W MSC3Q05812 728 aa5.94□□□□□ -1.46
VMS1YDR049W NGL1Q08213 363 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W YOR111WQ99210 232 aa5.94□□□□□ -1.46
VMS1YDR049W SPT6P23615 1451 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W CDC24P11433 854 aaPredicted RBP5.94□□□□□ -1.46
VMS1YDR049W MSS116P15424 664 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W SIR1P21691 654 aa5.94□□□□□ -1.46
VMS1YDR049W CYS3P31373 394 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W DEP1P31385 405 aa5.94□□□□□ -1.46
VMS1YDR049W BMH2P34730 273 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W MAC1P35192 417 aa5.94□□□□□ -1.46
VMS1YDR049W FLC2P39719 783 aa5.94□□□□□ -1.46
VMS1YDR049W ALT2P52892 507 aa5.94□□□□□ -1.46
VMS1YDR049W MSN5P52918 1224 aa5.94□□□□□ -1.46
VMS1YDR049W RTN1Q04947 295 aaKnown RBP5.94□□□□□ -1.46
VMS1YDR049W ARR2Q06597 130 aa5.94□□□□□ -1.46
VMS1YDR049W TCO89Q08921 799 aa5.94□□□□□ -1.46
VMS1YDR049W ISN1Q99312 450 aa5.94□□□□□ -1.46
VMS1YDR049W RPP2BP02400 110 aaKnown RBP5.93□□□□□ -1.46
VMS1YDR049W STE12P13574 688 aa5.93□□□□□ -1.46
VMS1YDR049W CDC42P19073 191 aa5.93□□□□□ -1.46
VMS1YDR049W HXT4P32467 576 aa5.93□□□□□ -1.46
VMS1YDR049W ADD66P36040 267 aa5.93□□□□□ -1.46
VMS1YDR049W STV1P37296 890 aa5.93□□□□□ -1.46
VMS1YDR049W EFM2P38347 419 aa5.93□□□□□ -1.46
VMS1YDR049W KEL1P38853 1164 aaKnown RBP5.93□□□□□ -1.46
VMS1YDR049W YIL165CP40446 119 aa5.93□□□□□ -1.46
VMS1YDR049W MET18P40469 1032 aa5.93□□□□□ -1.46
VMS1YDR049W NUP85P46673 744 aa5.93□□□□□ -1.46
VMS1YDR049W CUE3P53137 624 aaKnown RBP5.93□□□□□ -1.46
VMS1YDR049W NGL3Q03210 505 aa5.93□□□□□ -1.46
VMS1YDR049W ABZ2Q03266 374 aa5.93□□□□□ -1.46
VMS1YDR049W UFO1Q04511 668 aa5.93□□□□□ -1.46
VMS1YDR049W SSQ1Q05931 657 aaPredicted RBP5.93□□□□□ -1.46
VMS1YDR049W SLK19Q08581 821 aaKnown RBP5.93□□□□□ -1.46
VMS1YDR049W NBP2Q12163 236 aa5.93□□□□□ -1.46
VMS1YDR049W RPS9AO13516 197 aaKnown RBP5.92□□□□□ -1.46
VMS1YDR049W JIP3O13555 125 aa5.92□□□□□ -1.46
VMS1YDR049W RPS9BP05755 195 aaKnown RBP5.92□□□□□ -1.46
VMS1YDR049W CBS1P14066 229 aa5.92□□□□□ -1.46
VMS1YDR049W EST1P17214 699 aaPredicted RBP5.92□□□□□ -1.46
VMS1YDR049W DAP2P18962 818 aa5.92□□□□□ -1.46
VMS1YDR049W MEI5P32489 222 aa5.92□□□□□ -1.46
VMS1YDR049W CBF5P33322 483 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
VMS1YDR049W SRO77P38163 1010 aa5.92□□□□□ -1.46
VMS1YDR049W YEL057CP39983 233 aa5.92□□□□□ -1.46
VMS1YDR049W HXT16P47185 567 aa5.92□□□□□ -1.46
VMS1YDR049W NIT3P49954 291 aa5.92□□□□□ -1.46
VMS1YDR049W CRN1Q06440 651 aa5.92□□□□□ -1.46
VMS1YDR049W YLR413WQ06689 675 aa5.92□□□□□ -1.46
VMS1YDR049W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
VMS1YDR049W PRB1P09232 635 aa5.92□□□□□ -1.46
VMS1YDR049W UNG1P12887 359 aa5.92□□□□□ -1.46
VMS1YDR049W CDC26P14724 124 aa5.92□□□□□ -1.46
VMS1YDR049W YCK1P23291 538 aa5.92□□□□□ -1.46
VMS1YDR049W EFT1P32324 842 aaKnown RBP5.92□□□□□ -1.46
VMS1YDR049W CDC12P32468 407 aaKnown RBP5.92□□□□□ -1.46
VMS1YDR049W MKS1P34072 584 aa5.92□□□□□ -1.46
VMS1YDR049W SIP3P38717 1229 aa5.92□□□□□ -1.46
VMS1YDR049W FTR1P40088 404 aa5.92□□□□□ -1.46
VMS1YDR049W GCR2Q01722 534 aa5.92□□□□□ -1.46
VMS1YDR049W SEG1Q04279 960 aa5.92□□□□□ -1.46
VMS1YDR049W BOP2Q06150 570 aa5.92□□□□□ -1.46
VMS1YDR049W BRR1Q99177 341 aaPredicted RBP5.92□□□□□ -1.46
VMS1YDR049W GLN4P13188 809 aaKnown RBP5.91□□□□□ -1.46
VMS1YDR049W SWI4P25302 1093 aaKnown RBP5.91□□□□□ -1.46
VMS1YDR049W ERV1P27882 189 aa5.91□□□□□ -1.46
VMS1YDR049W YKL077WP36081 392 aa5.91□□□□□ -1.46
VMS1YDR049W YKR018CP36114 725 aa5.91□□□□□ -1.46
VMS1YDR049W LIN1P38852 340 aaPredicted RBP5.91□□□□□ -1.46
VMS1YDR049W MNL1P38888 796 aa5.91□□□□□ -1.46
VMS1YDR049W VID28P40547 921 aa5.91□□□□□ -1.46
VMS1YDR049W CHS6P40955 746 aa5.91□□□□□ -1.46
VMS1YDR049W RRN7P40992 514 aa5.91□□□□□ -1.46
VMS1YDR049W ALY2P47029 1046 aa5.91□□□□□ -1.46
VMS1YDR049W ENP2P48234 707 aaKnown RBP5.91□□□□□ -1.46
VMS1YDR049W YGL242CP53066 181 aa5.91□□□□□ -1.46
VMS1YDR049W MRPL1Q04599 285 aa5.91□□□□□ -1.46
VMS1YDR049W RRN11Q04712 507 aa5.91□□□□□ -1.46
VMS1YDR049W SWT1Q12104 458 aa5.91□□□□□ -1.46
VMS1YDR049W CTF3Q12748 733 aa5.91□□□□□ -1.46
VMS1YDR049W TUB2P02557 457 aaKnown RBP5.9□□□□□ -1.46
VMS1YDR049W RPL1AP0CX43 217 aaKnown RBP5.9□□□□□ -1.46
VMS1YDR049W RPL1BP0CX44 217 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms