RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C SKM1Q12469 655 aa5.85□□□□□ -1.47
PDB1YBR221C YIL002W-AQ3E7Z5 69 aa5.85□□□□□ -1.47
PDB1YBR221C BIK1P11709 440 aa5.84□□□□□ -1.47
PDB1YBR221C APE1P14904 514 aa5.84□□□□□ -1.47
PDB1YBR221C DBP5P20449 482 aaKnown RBP5.84□□□□□ -1.47
PDB1YBR221C PWP1P21304 576 aaKnown RBP5.84□□□□□ -1.47
PDB1YBR221C OCA4P25366 362 aa5.84□□□□□ -1.47
PDB1YBR221C ADP1P25371 1049 aa5.84□□□□□ -1.47
PDB1YBR221C CWH43P25618 953 aa5.84□□□□□ -1.47
PDB1YBR221C PHO91P27514 894 aa5.84□□□□□ -1.47
PDB1YBR221C KRE2P27809 442 aa5.84□□□□□ -1.47
PDB1YBR221C KIP1P28742 1111 aa5.84□□□□□ -1.47
PDB1YBR221C ACP1P32463 125 aa5.84□□□□□ -1.47
PDB1YBR221C OAF3P36023 863 aa5.84□□□□□ -1.47
PDB1YBR221C SAP190P36123 1033 aa5.84□□□□□ -1.47
PDB1YBR221C MRPL36P36531 177 aa5.84□□□□□ -1.47
PDB1YBR221C IFA38P38286 347 aa5.84□□□□□ -1.47
PDB1YBR221C AIM46P38885 310 aa5.84□□□□□ -1.47
PDB1YBR221C YHR202WP38887 602 aa5.84□□□□□ -1.47
PDB1YBR221C YDR089WP38966 869 aa5.84□□□□□ -1.47
PDB1YBR221C QDR2P40474 542 aa5.84□□□□□ -1.47
PDB1YBR221C PAN2P53010 1115 aaPredicted RBP5.84□□□□□ -1.47
PDB1YBR221C CUL3P53202 744 aa5.84□□□□□ -1.47
PDB1YBR221C DAM1P53267 343 aa5.84□□□□□ -1.47
PDB1YBR221C YGR283CP53336 341 aaPredicted RBP5.84□□□□□ -1.47
PDB1YBR221C YVH1Q02256 364 aaKnown RBP5.84□□□□□ -1.47
PDB1YBR221C NHX1Q04121 633 aa5.84□□□□□ -1.47
PDB1YBR221C ISU2Q12056 156 aa5.84□□□□□ -1.47
PDB1YBR221C PHO5P00635 467 aa5.83□□□□□ -1.48
PDB1YBR221C NOT3P06102 836 aaKnown RBP5.83□□□□□ -1.48
PDB1YBR221C GAL7P08431 366 aa5.83□□□□□ -1.48
PDB1YBR221C MSS116P15424 664 aaKnown RBP5.83□□□□□ -1.48
PDB1YBR221C CLB4P24871 460 aa5.83□□□□□ -1.48
PDB1YBR221C PRD1P25375 712 aa5.83□□□□□ -1.48
PDB1YBR221C CCR4P31384 837 aaKnown RBP5.83□□□□□ -1.48
PDB1YBR221C PXL1P36166 706 aa5.83□□□□□ -1.48
PDB1YBR221C SHU2P38957 223 aa5.83□□□□□ -1.48
PDB1YBR221C GIP4P39732 760 aa5.83□□□□□ -1.48
PDB1YBR221C MRX1P40050 688 aa5.83□□□□□ -1.48
PDB1YBR221C YIR014WP40570 242 aa5.83□□□□□ -1.48
PDB1YBR221C MMM1P41800 426 aa5.83□□□□□ -1.48
PDB1YBR221C HXT10P43581 546 aa5.83□□□□□ -1.48
PDB1YBR221C DUO1P53168 247 aaKnown RBP5.83□□□□□ -1.48
PDB1YBR221C DSE4P53753 1117 aa5.83□□□□□ -1.48
PDB1YBR221C ISU1Q03020 165 aa5.83□□□□□ -1.48
PDB1YBR221C UBX2Q04228 584 aa5.83□□□□□ -1.48
PDB1YBR221C LUC7Q07508 261 aaPredicted RBP5.83□□□□□ -1.48
PDB1YBR221C MET7Q08645 548 aa5.83□□□□□ -1.48
PDB1YBR221C SPE3Q12074 293 aaKnown RBP5.83□□□□□ -1.48
PDB1YBR221C CHS5Q12114 671 aaKnown RBP5.83□□□□□ -1.48
PDB1YBR221C NSI1Q12457 570 aa5.83□□□□□ -1.48
PDB1YBR221C AIR2Q12476 344 aaKnown RBP5.83□□□□□ -1.48
PDB1YBR221C YBL111CQ3E7Y5 667 aa5.83□□□□□ -1.48
PDB1YBR221C FIG2P25653 1609 aa5.83□□□□□ -1.48
PDB1YBR221C CBP1P07252 654 aa5.82□□□□□ -1.48
PDB1YBR221C MEI5P32489 222 aa5.82□□□□□ -1.48
PDB1YBR221C CBF5P33322 483 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
PDB1YBR221C SRB2P34162 210 aa5.82□□□□□ -1.48
PDB1YBR221C TGL1P34163 548 aa5.82□□□□□ -1.48
PDB1YBR221C PGM2P37012 569 aaKnown RBP5.82□□□□□ -1.48
PDB1YBR221C YRO2P38079 344 aa5.82□□□□□ -1.48
PDB1YBR221C YBR138CP38277 524 aa5.82□□□□□ -1.48
PDB1YBR221C MSG5P38590 489 aa5.82□□□□□ -1.48
PDB1YBR221C YHR097CP38809 366 aaKnown RBP5.82□□□□□ -1.48
PDB1YBR221C RPN10P38886 268 aaKnown RBP5.82□□□□□ -1.48
PDB1YBR221C SIP5P40210 489 aaKnown RBP5.82□□□□□ -1.48
PDB1YBR221C EFM4P40516 257 aa5.82□□□□□ -1.48
PDB1YBR221C PRM2P40534 656 aa5.82□□□□□ -1.48
PDB1YBR221C LCL3P53153 274 aa5.82□□□□□ -1.48
PDB1YBR221C BRE5P53741 515 aaKnown RBP5.82□□□□□ -1.48
PDB1YBR221C UBP2Q01476 1272 aa5.82□□□□□ -1.48
PDB1YBR221C SRC1Q03707 834 aa5.82□□□□□ -1.48
PDB1YBR221C ECM18Q04623 453 aa5.82□□□□□ -1.48
PDB1YBR221C ECM22Q05958 814 aaPredicted RBP5.82□□□□□ -1.48
PDB1YBR221C DUS3Q06053 668 aaKnown RBP5.82□□□□□ -1.48
PDB1YBR221C VPS54Q12071 889 aa5.82□□□□□ -1.48
PDB1YBR221C PSF3Q12146 194 aa5.82□□□□□ -1.48
PDB1YBR221C AHC1Q12433 566 aa5.82□□□□□ -1.48
PDB1YBR221C RPS21BQ3E754 87 aaKnown RBP5.82□□□□□ -1.48
PDB1YBR221C FAS2P19097 1887 aaKnown RBP5.81□□□□□ -1.48
PDB1YBR221C TDH1P00360 332 aaKnown RBP5.81□□□□□ -1.48
PDB1YBR221C DED1P06634 604 aaKnown RBP5.81□□□□□ -1.48
PDB1YBR221C PRP6P19735 899 aaPredicted RBP5.81□□□□□ -1.48
PDB1YBR221C ATP12P22135 325 aa5.81□□□□□ -1.48
PDB1YBR221C PYC2P32327 1180 aaKnown RBP5.81□□□□□ -1.48
PDB1YBR221C SRB4P32569 687 aa5.81□□□□□ -1.48
PDB1YBR221C UBP11P36026 717 aa5.81□□□□□ -1.48
PDB1YBR221C EMC3P36039 253 aa5.81□□□□□ -1.48
PDB1YBR221C HEL1P36113 551 aa5.81□□□□□ -1.48
PDB1YBR221C GIP1P38229 639 aa5.81□□□□□ -1.48
PDB1YBR221C YSW1P38280 609 aa5.81□□□□□ -1.48
PDB1YBR221C YHL017WP38745 532 aa5.81□□□□□ -1.48
PDB1YBR221C YHB1P39676 399 aaKnown RBP5.81□□□□□ -1.48
PDB1YBR221C HNT2P49775 206 aa5.81□□□□□ -1.48
PDB1YBR221C RTC4P53850 401 aa5.81□□□□□ -1.48
PDB1YBR221C PDR16P53860 351 aaKnown RBP5.81□□□□□ -1.48
PDB1YBR221C PDS5Q04264 1277 aa5.81□□□□□ -1.48
PDB1YBR221C YDR514CQ04408 483 aa5.81□□□□□ -1.48
PDB1YBR221C CRN1Q06440 651 aa5.81□□□□□ -1.48
PDB1YBR221C PML1Q07930 204 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms