RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
SDCBP-205ENST00000447267 GLMNQ92990 594 aa7.27□□□□□ -1.25
SDCBP-205ENST00000447267 ZNF594Q96JF6 807 aaPredicted RBP7.27□□□□□ -1.25
SDCBP-205ENST00000447267 NBPF4Q96M43 638 aa7.27□□□□□ -1.25
SDCBP-205ENST00000447267 SPOCK3Q9BQ16 436 aa7.27□□□□□ -1.25
SDCBP-205ENST00000447267 RPTORQ8N122 1335 aa7.27□□□□□ -1.25
SDCBP-205ENST00000447267 PAPPA2Q9BXP8 1791 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 SCN11AQ9UI33 1791 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 TMEM132AQ24JP5 1023 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 SLC4A8Q2Y0W8 1093 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 OTOP1Q7RTM1 612 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 TRIM50Q86XT4 487 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 SIX5Q8N196 739 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 RAPGEF4Q8WZA2 1011 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 FAM161BQ96MY7 647 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 GUCD1Q96NT3 240 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 MDFIQ99750 246 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 GBA2Q9HCG7 927 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-205ENST00000447267 TMOD3Q9NYL9 352 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 TFIP11Q9UBB9 837 aaKnown RBP7.26□□□□□ -1.25
SDCBP-205ENST00000447267 MAFBQ9Y5Q3 323 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-205ENST00000447267 CNTNAP4Q9C0A0 1308 aa7.26□□□□□ -1.25
SDCBP-205ENST00000447267 KIAA0100Q14667 2235 aaKnown RBP7.25□□□□□ -1.25
SDCBP-205ENST00000447267 A0A1W2PPC1 479 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 IGHA1P01876 353 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 FBLN1P23142 703 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 CRKLP46109 303 aaKnown RBP7.25□□□□□ -1.25
SDCBP-205ENST00000447267 HIRAP54198 1017 aaPredicted RBP7.25□□□□□ -1.25
SDCBP-205ENST00000447267 EIF6P56537 245 aaKnown RBP7.25□□□□□ -1.25
SDCBP-205ENST00000447267 FKBP4Q02790 459 aaKnown RBP eCLIP7.25□□□□□ -1.25
SDCBP-205ENST00000447267 SFSWAPQ12872 951 aaKnown RBP7.25□□□□□ -1.25
SDCBP-205ENST00000447267 NME9Q86XW9 330 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 ZNF280CQ8ND82 737 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 GAS2L2Q8NHY3 880 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 ARMC5Q96C12 935 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 HSH2DQ96JZ2 352 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 SLC30A3Q99726 388 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 MKL2Q9ULH7 1088 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 ZNF232Q9UNY5 417 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 PTPN22Q9Y2R2 807 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 TTC21AQ8NDW8 1320 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 PCDH11XQ9BZA7 1347 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 PCDH11YQ9BZA8 1340 aa7.25□□□□□ -1.25
SDCBP-205ENST00000447267 SERTM1A2A2V5 107 aa7.24□□□□□ -1.25
SDCBP-205ENST00000447267 LGR5O75473 907 aa7.24□□□□□ -1.25
SDCBP-205ENST00000447267 IARSP41252 1262 aaKnown RBP7.24□□□□□ -1.25
SDCBP-205ENST00000447267 ZNF468Q5VIY5 522 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-205ENST00000447267 CHSY3Q70JA7 882 aa7.24□□□□□ -1.25
SDCBP-205ENST00000447267 CDC37L1Q7L3B6 337 aa7.24□□□□□ -1.25
SDCBP-205ENST00000447267 LARGE2Q8N3Y3 721 aa7.24□□□□□ -1.25
SDCBP-205ENST00000447267 C2orf69Q8N8R5 385 aa7.24□□□□□ -1.25
SDCBP-205ENST00000447267 HCN4Q9Y3Q4 1203 aa7.24□□□□□ -1.25
SDCBP-205ENST00000447267 DICER1Q9UPY3 1922 aaKnown RBP7.24□□□□□ -1.25
SDCBP-205ENST00000447267 TTC28Q96AY4 2481 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 MAP2P11137 1827 aaKnown RBP7.23□□□□□ -1.25
SDCBP-205ENST00000447267 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-205ENST00000447267 ADH6P28332 368 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 ATP1A2P50993 1020 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 CCDC93Q567U6 631 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 RASAL3Q86YV0 1011 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 COL26A1Q96A83 441 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 P2RX7Q99572 595 aaKnown RBP7.23□□□□□ -1.25
SDCBP-205ENST00000447267 ADARB2Q9NS39 739 aaKnown RBP7.23□□□□□ -1.25
SDCBP-205ENST00000447267 MARK1Q9P0L2 795 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 PGAP2Q9UHJ9 254 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 LAMB4A4D0S4 1761 aa7.23□□□□□ -1.25
SDCBP-205ENST00000447267 TRPM7Q96QT4 1865 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 M0R2N6 131 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 AMPD1P23109 780 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 PDE6BP35913 854 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 PSMA6P60900 246 aaKnown RBP7.22□□□□□ -1.25
SDCBP-205ENST00000447267 CRTC2Q53ET0 693 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-205ENST00000447267 SOGA3Q5TF21 947 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 TRPM4Q8TD43 1214 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 JDP2Q8WYK2 163 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 TRIM11Q96F44 468 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 ZNF333Q96JL9 665 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 PHACTR1Q9C0D0 580 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 AVENQ9NQS1 362 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-205ENST00000447267 NR2E3Q9Y5X4 410 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 CD163L1Q9NR16 1453 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 IRS2Q9Y4H2 1338 aa7.22□□□□□ -1.25
SDCBP-205ENST00000447267 FER1L6Q2WGJ9 1857 aa7.21□□□□□ -1.25
SDCBP-205ENST00000447267 KDRP35968 1356 aa7.21□□□□□ -1.25
SDCBP-205ENST00000447267 MSTNO14793 375 aa7.21□□□□□ -1.26
SDCBP-205ENST00000447267 LAMC2Q13753 1193 aa7.21□□□□□ -1.26
SDCBP-205ENST00000447267 INTS5Q6P9B9 1019 aaKnown RBP7.21□□□□□ -1.26
SDCBP-205ENST00000447267 RAB44Q7Z6P3 723 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-205ENST00000447267 MAFAQ8NHW3 353 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-205ENST00000447267 RHPN1Q8TCX5 695 aa7.21□□□□□ -1.26
SDCBP-205ENST00000447267 BRIP1Q9BX63 1249 aa7.21□□□□□ -1.26
SDCBP-205ENST00000447267 GPRC5DQ9NZD1 345 aa7.21□□□□□ -1.26
SDCBP-205ENST00000447267 CACNA1GO43497 2377 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 SMG6Q86US8 1419 aaKnown RBP7.2□□□□□ -1.26
SDCBP-205ENST00000447267 LAMA3Q16787 3333 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 SHTN1A0MZ66 631 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 ADM5C9JUS6 153 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 PTCD1O75127 700 aaKnown RBP7.2□□□□□ -1.26
SDCBP-205ENST00000447267 RASA1P20936 1047 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 HOXC9P31274 260 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms