RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Mpv17l2Q8VIK2 200 aa12.36□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Ighv5-9-1A0A0A6YVS4 126 aa12.36□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Reg3gO09049 174 aa12.35□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Ccl25O35903 144 aa12.35□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Edn1P22387 202 aa12.35□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Fam216bQ8CC14 138 aa12.35□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Asxl3Q8C4A5 2259 aa12.35□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Igkv4-58A0A0G2JGI6 119 aa12.35□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Ss18l2Q9D174 77 aa12.34□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Rp1P56716 2095 aa12.34□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Mrps12O35680 139 aa12.34□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Oxld1Q9CR10 201 aa12.34□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Gm17677B3GLJ5 116 aa12.34□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Cfap46E9Q2C0 2641 aa12.34□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Ighv1-64A0A075B5X3 117 aa12.33□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Trav6n-6A0A075B6B2 114 aa12.33□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Hoxd3P09027 433 aa12.33□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Fam110dQ80X91 271 aa12.33□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Defb29Q8BGW9 78 aa12.33□□□□□ -0.43
Ubr2-201ENSMUST00000113335 Lage3Q9CR70 148 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ighv1-62-2A0A0A6YXZ4 119 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ighv1-74A0A0G2JGK2 117 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 BB014433Q8C5R5 389 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Tmem210Q9D2F0 147 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 AcacaQ5SWU9 2345 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Rnf114Q9ET26 229 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Igkv4-57A0A0A6YYE7 117 aa12.33□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Adamts9E9PUN6 1931 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Igkv8-34A0A0G2JDU0 121 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gm9961Q8BNV2 113 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gm20499D3Z4G5 72 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ighv5-8A0A075B676 92 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gm17455G3UW87 128 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Q08AU9 97 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Fam24aQ8CF27 98 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Col6a4A2AX52 2309 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Med12A2AGH6 2190 aa12.32□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gm20730A0A075B5J6 119 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gm10638F6QEG2 257 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ccl21aP84444 133 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ccl21bP86792 133 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ccl21cP86793 133 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Klhdc3Q8VEM9 382 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ighv1-4A0A075B5T4 117 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 P01739 132 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 NpsP0C0P8 89 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Zc2hc1aQ8BJH1 324 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Slc25a29Q8BL03 306 aa12.31□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Sptan1P16546 2472 aaKnown RBP12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Trav12d-3A0A075B6A4 115 aa12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gm9970F6ZED4 185 aa12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 P06330 118 aa12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Olfr311Q5NC59 308 aa12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Mrpl52Q9D0Y8 121 aa12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Tnrc6aQ3UHK8 1896 aaKnown RBP12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Trav6-6A0A075B603 114 aa12.3□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Rbm3O89086 153 aaKnown RBP12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 P04945 108 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gata1P17679 413 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ifitm1Q9D103 106 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Wfdc2Q9DAU7 174 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ndufa12Q7TMF3 145 aaKnown RBP12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Dock7Q8R1A4 2130 aaKnown RBP12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Sp5Q9JHX2 398 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Gm20481G3UXK4 153 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 BC048562Q80ZQ7 204 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Fam110aQ8R184 296 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Atg2aQ6P4T0 1914 aa12.29□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ighv1-50A0A075B5W1 117 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Trbv14A0A140T8L9 115 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Dmrtc1c1Q9D410 238 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Ighv3-6P18531 116 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Plxna4Q80UG2 1893 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Inafm2A0A1L1STD6 152 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Rbmy1bQ60990 380 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Tmem243B2RVB9 118 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Defb47Q30KN1 79 aa12.28□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Srsf2Q62093 221 aaKnown RBP12.27□□□□□ -0.44
Ubr2-201ENSMUST00000113335 Cdpf1Q8R3A2 119 aa12.27□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Rspo3Q2TJ95 277 aa12.27□□□□□ -0.45
Ubr2-201ENSMUST00000113335 SelenowP63300 88 aa12.26□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Crlf1Q9JM58 425 aa12.26□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Col4a5Q63ZW6 1691 aa12.26□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Igkv4-74A0A0B4J1I3 119 aa12.25□□□□□ -0.45
Ubr2-201ENSMUST00000113335 LoxP28301 411 aa12.25□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Nop10Q9CQS2 64 aa12.25□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Prr14lE9Q7C4 1971 aa12.24□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Pcnx1Q9QYC1 2344 aa12.24□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Ighv1-77A0A0G2JGS9 117 aa12.24□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Fancd2osQ9D4K4 178 aa12.24□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Cnot1Q6ZQ08 2375 aaKnown RBP12.24□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Erdr1J3QMM0 206 aa12.24□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Ighv13-2A0A0A6YWN3 119 aa12.23□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Gm17324Q8C6J8 137 aa12.23□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Col6a6Q8C6K9 2265 aa12.23□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Fstl3Q9EQC7 256 aa12.23□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Gm5941Q497P9 117 aa12.22□□□□□ -0.45
Ubr2-201ENSMUST00000113335 P04940 107 aa12.22□□□□□ -0.45
Ubr2-201ENSMUST00000113335 P04941 107 aa12.22□□□□□ -0.45
Ubr2-201ENSMUST00000113335 Trbv13-1A0A0B4J1P8 112 aa12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms