RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Borcs7Q9CRC6 105 aa11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ssbp1Q9CYR0 152 aaKnown RBP11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 Mrpl53Q9D1H8 118 aaKnown RBP11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 Mrpl32Q9DCI9 187 aaKnown RBP11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gm3233E9Q2H5 230 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 LhbO09108 141 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Fxyd7P59648 80 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Rps20P60867 119 aaKnown RBP11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ndufa4l2Q4FZG9 87 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Hspe1Q64433 102 aaKnown RBP11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Tnfsf18Q7TS55 173 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Rnf183Q8QZS5 190 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Tmem160Q9D938 188 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Cml3Q9JIY8 226 aa11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Fbn1Q61554 2873 aaKnown RBP11.07□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ighv2-3A0A075B696 115 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Trav3n-3A0A0G2JEM0 114 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gtsf1lQ9CWD0 151 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Nit2Q9JHW2 276 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Psmb2Q9R1P3 201 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Fhl2O70433 279 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Crip3Q6Q6R3 243 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Cd99Q8VCN6 175 aa11.06□□□□□ -0.64
Nup88-202ENSMUST00000108530 Trav12-3A0A075B648 115 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ighv8-6A0A0A6YXA3 118 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Olfr869E9PX82 323 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ang6Q5GAN0 147 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Omt2bD3YX29 119 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Psmb11Q8BG41 302 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ube2tQ9CQ37 204 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 RhohQ9D3G9 191 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Klf13Q9JJZ6 289 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Rabac1Q9Z0S9 185 aa11.05□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ighv1-23A0A0A6YVW3 117 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gm45623A0A1B0GSF6 103 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 P01747 120 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Snrpd3P62320 126 aaKnown RBP11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gm6040Q4QY32 63 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Prr3Q811B5 190 aaKnown RBP11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gpr82Q8BZR0 328 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Esp38A8R0X1 80 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 1810032O08RikE9PZV8 113 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 P01736 120 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Khdc1aQ3UWR2 166 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Q9D131 166 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 AY761184Q9D848 116 aa11.04□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ighv8-4A0A0A6YW26 117 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 1520401A03RikA0A0J9YVH6 598 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 SbsponQ3UPR9 264 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Ormdl3Q9CPZ6 153 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Mcrip2Q9CQB2 160 aaKnown RBP11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gm29666A0A087WQ99 126 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gm9767G3X930 207 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gng7Q61016 68 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Odf3Q920N1 254 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Leprotl1Q9CQ74 131 aa11.03□□□□□ -0.64
Nup88-202ENSMUST00000108530 Gm5157A0A087WRH8 301 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 4930447F04RikA2AFR2 126 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Reg3gO09049 174 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Plscr4P58196 326 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 7420426K07RikQ3UX66 186 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Cd33Q63994 403 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Nat8f4G5E8L3 226 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Psmg4P0C7N9 123 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 SstP60041 116 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Atp5iQ06185 71 aaKnown RBP11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm12888Q3UW77 119 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Pmis2Q497Q9 96 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 Dusp14Q9JLY7 198 aa11.02□□□□□ -0.65
Nup88-202ENSMUST00000108530 P01756 117 aa11.01□□□□□ -0.65
Nup88-202ENSMUST00000108530 P01757 117 aa11.01□□□□□ -0.65
Nup88-202ENSMUST00000108530 Rnf185Q91YT2 192 aa11.01□□□□□ -0.65
Nup88-202ENSMUST00000108530 Lcn2P11672 200 aa11.01□□□□□ -0.65
Nup88-202ENSMUST00000108530 Fam213bQ9DB60 201 aa11.01□□□□□ -0.65
Nup88-202ENSMUST00000108530 Scgb1b11A0A087WQJ0 93 aa11□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm5426J3QNM7 103 aa11□□□□□ -0.65
Nup88-202ENSMUST00000108530 Thy1P01831 162 aa11□□□□□ -0.65
Nup88-202ENSMUST00000108530 Tex26Q0VB26 296 aa11□□□□□ -0.65
Nup88-202ENSMUST00000108530 Ndufb4Q9CQC7 129 aa11□□□□□ -0.65
Nup88-202ENSMUST00000108530 AtrQ9JKK8 2635 aa11□□□□□ -0.65
Nup88-202ENSMUST00000108530 TshbP12656 138 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Psmb8P28063 276 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 9130213A22RikQ3V3T2 120 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Slc16a4Q8R0M8 500 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Tppp3Q9CRB6 176 aaKnown RBP10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 PdfS4R2K0 231 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Dmbt1Q60997 2085 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm2564F6Z9S8 108 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Ccl19O70460 108 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Klk1b4P00757 256 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 P06330 118 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 NpyP57774 97 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Q24JP4 165 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Rbfox3Q8BIF2 374 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Klk7Q91VE3 249 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Mrpl36Q99N90 102 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Vps25Q9CQ80 176 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gkn1Q9CR36 201 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Lamtor2Q9JHS3 125 aa10.99□□□□□ -0.65
Nup88-202ENSMUST00000108530 Ramp1Q9WTJ5 148 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms