RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Ighv5-9A0A075B5Q2 117 aa10.45□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Trav9-1A0A075B601 112 aa10.45□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 IappP12968 93 aa10.45□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Lyz1P17897 148 aa10.45□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 4930596D02RikQ3V0H9 216 aa10.45□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Rbfox3Q8BIF2 374 aa10.45□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 AY761184Q9D848 116 aa10.45□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 1520401A03RikA0A0J9YVH6 598 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Esp3J3QN49 87 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 P01837 106 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Ccl2P10148 148 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Ighv3-6P18531 116 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Cks1brtQ3UNC9 96 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Lgals4Q8K419 326 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Pgpep1lQ9CWB5 130 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Q9DAQ5 155 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 HilpdaQ9JLS0 64 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Med12A2AGH6 2190 aa10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 DspE9Q557 2883 aaKnown RBP10.44□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Trbv31A0A075B5J5 111 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Gm12845A0A0N4SUM5 588 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Casp6O08738 276 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 P01783 136 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 P18527 97 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Ros1Q78DX7 2340 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Vma21-psA0A140T8R2 101 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Q08AU9 97 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Gm4763Q8CFJ5 196 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Gemin7Q9CWY4 129 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Ccl8Q9Z121 97 aa10.43□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Gm6525A0A0A6YW33 106 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 KprpB2RUR4 657 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Fxyd3Q61835 88 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Gm9961Q8BNV2 113 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Olfr1454Q8VFW2 307 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Srsf9Q9D0B0 222 aaKnown RBP10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Plac1Q9JI83 173 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Rnase4Q9JJH1 148 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Fam208bQ5DTT3 2382 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Apoc4Q61268 124 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 NpbQ8K4P1 119 aa10.42□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Brd3osA0A1B0GRB6 84 aa10.41□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 F5O88783 2183 aa10.41□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Rpl27aP14115 148 aaKnown RBP10.41□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Npc2Q9Z0J0 149 aa10.41□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Shisal2aA2A9G7 189 aa10.4□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Gm5093E9PZB3 174 aa10.4□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Gm28044L7N1X0 119 aa10.4□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Csn3P06796 181 aa10.4□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Ptrh2Q8R2Y8 181 aaKnown RBP10.4□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Olfr1243Q8VGM7 305 aa10.4□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 Snai3Q9QY31 287 aa10.4□□□□□ -0.74
Nkx6-3-201ENSMUST00000071588 NpwA0A1L1STR8 176 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 P01726 129 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 NdpP48744 131 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 BC106179Q8C9L1 186 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Pradc1Q9D9N8 188 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Gm33815A0A087WNV3 176 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Znf239P24399 201 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Cox7a2P48771 83 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Morn3Q8C5T4 241 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Ubtd1Q91WB7 227 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Tac4Q99N14 128 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Q9D8Q6 235 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Wdr38Q9D994 303 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Lyrm7Q9DA03 104 aa10.39□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Trav3-4A0A075B654 114 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 CrygdP04342 174 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 GalmQ8K157 342 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 SonQ9QX47 2444 aaKnown RBP10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Smlr1J3QMJ4 66 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 CckP09240 115 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Gm1553Q66VB7 94 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Gpr82Q8BZR0 328 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Cyyr1Q8VIH7 165 aa10.38□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 P06334 169 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Lypd1Q8BLC3 141 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 A730015C16RikQ8C992 119 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 RetnQ99P87 114 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Trav9d-1A0A075B699 112 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Trbv17A0A140T8P8 114 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Gm28038F7BCN9 126 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 P04944 107 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Mllt11P97783 90 aa10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Srsf2Q62093 221 aaKnown RBP10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Crip2Q9DCT8 208 aaKnown RBP10.37□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Ttc28Q80XJ3 2450 aa10.36□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Ovol3D3YYM0 189 aa10.36□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Gm10135F6TEE5 83 aa10.36□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 ScxQ64124 207 aa10.36□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Dlx6P70397 175 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 SrarpQ3ULG3 163 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Ndufa4l2Q4FZG9 87 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Ss18Q62280 418 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Dpm2Q9Z324 84 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Sptan1P16546 2472 aaKnown RBP10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Fam240aJ3QNP9 97 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 P01812 117 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 CrygbP04344 175 aa10.35□□□□□ -0.75
Nkx6-3-201ENSMUST00000071588 Olfr1242Q8VGM6 306 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms