RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Sec16aA2AIX1 2377 aa13.68□□□□□ -0.22
Usp48-201ENSMUST00000055131 Igkv4-78A0A0A6YYE5 119 aa13.67□□□□□ -0.22
Usp48-201ENSMUST00000055131 Mustn1Q99JI1 82 aa13.67□□□□□ -0.22
Usp48-201ENSMUST00000055131 Tmem14cQ9CQN6 114 aa13.67□□□□□ -0.22
Usp48-201ENSMUST00000055131 Fam110aQ8R184 296 aa13.67□□□□□ -0.22
Usp48-201ENSMUST00000055131 Fancd2osQ9D4K4 178 aa13.67□□□□□ -0.22
Usp48-201ENSMUST00000055131 Dazap2Q9DCP9 168 aa13.67□□□□□ -0.22
Usp48-201ENSMUST00000055131 Rpl32P62911 135 aaKnown RBP13.66□□□□□ -0.22
Usp48-201ENSMUST00000055131 March3Q8BRX9 218 aa13.66□□□□□ -0.22
Usp48-201ENSMUST00000055131 Morn3Q8C5T4 241 aa13.66□□□□□ -0.22
Usp48-201ENSMUST00000055131 Mrps12O35680 139 aa13.66□□□□□ -0.22
Usp48-201ENSMUST00000055131 Rmi2Q3UPE3 149 aa13.66□□□□□ -0.22
Usp48-201ENSMUST00000055131 P01739 132 aa13.66□□□□□ -0.22
Usp48-201ENSMUST00000055131 P04945 108 aa13.66□□□□□ -0.22
Usp48-201ENSMUST00000055131 Olfr313Q5NC55 308 aa13.65□□□□□ -0.22
Usp48-201ENSMUST00000055131 P06330 118 aa13.65□□□□□ -0.22
Usp48-201ENSMUST00000055131 Rspo3Q2TJ95 277 aa13.65□□□□□ -0.23
Usp48-201ENSMUST00000055131 BC048502Q80Y74 154 aa13.65□□□□□ -0.23
Usp48-201ENSMUST00000055131 Gm17324Q8C6J8 137 aa13.65□□□□□ -0.23
Usp48-201ENSMUST00000055131 Tcf20Q9EPQ8 1987 aa13.64□□□□□ -0.23
Usp48-201ENSMUST00000055131 Gm21994F6T2D2 329 aa13.64□□□□□ -0.23
Usp48-201ENSMUST00000055131 AtrxQ61687 2476 aaKnown RBP13.64□□□□□ -0.23
Usp48-201ENSMUST00000055131 Rasl10aQ8K5A4 203 aa13.64□□□□□ -0.23
Usp48-201ENSMUST00000055131 Morn5Q9DAI9 170 aa13.64□□□□□ -0.23
Usp48-201ENSMUST00000055131 Ighv1-50A0A075B5W1 117 aa13.64□□□□□ -0.23
Usp48-201ENSMUST00000055131 Tal2Q62282 108 aa13.63□□□□□ -0.23
Usp48-201ENSMUST00000055131 Gm20499D3Z4G5 72 aa13.63□□□□□ -0.23
Usp48-201ENSMUST00000055131 Igkv6-13A0A0G2JGY3 119 aa13.63□□□□□ -0.23
Usp48-201ENSMUST00000055131 Plxna2P70207 1894 aa13.62□□□□□ -0.23
Usp48-201ENSMUST00000055131 Olfr311Q5NC59 308 aa13.62□□□□□ -0.23
Usp48-201ENSMUST00000055131 4930415O20RikQ8CDT5 131 aa13.62□□□□□ -0.23
Usp48-201ENSMUST00000055131 Nop10Q9CQS2 64 aa13.62□□□□□ -0.23
Usp48-201ENSMUST00000055131 4930442H23RikQ9D5G7 103 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Nup210lQ9D2F7 1881 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Trav12-3A0A075B648 115 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Gm10553J3QPF1 123 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Hoxd3P09027 433 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Il22ra2Q80XF5 230 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Eml5Q8BQM8 1977 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Trbv14A0A140T8L9 115 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Gm17677B3GLJ5 116 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Ccl24Q9JKC0 119 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 PkigO70139 76 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Mpv17l2Q8VIK2 200 aa13.61□□□□□ -0.23
Usp48-201ENSMUST00000055131 Ubl5Q9EPV8 73 aa13.6□□□□□ -0.23
Usp48-201ENSMUST00000055131 Frem1Q684R7 2191 aa13.6□□□□□ -0.23
Usp48-201ENSMUST00000055131 Defb29Q8BGW9 78 aa13.6□□□□□ -0.23
Usp48-201ENSMUST00000055131 Zfp407G3UVV3 2246 aa13.6□□□□□ -0.23
Usp48-201ENSMUST00000055131 Tmem131O70472 1877 aa13.6□□□□□ -0.23
Usp48-201ENSMUST00000055131 Defa21Q8C1P2 93 aa13.6□□□□□ -0.23
Usp48-201ENSMUST00000055131 Gm20730A0A075B5J6 119 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 B230307C23RikQ8BLB2 64 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 Ighv13-2A0A0A6YWN3 119 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 Pet100P0DJE0 76 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 Gvin1Q80SU7 2427 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 Clec4b2Q67DU8 208 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 Myo7bQ99MZ6 2113 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 Rai1Q61818 1889 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 BC048562Q80ZQ7 204 aa13.59□□□□□ -0.23
Usp48-201ENSMUST00000055131 Trav4n-4A0A075B615 110 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Trav9-2A0A075B647 113 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Trav9-4A0A0B4J1K2 113 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Gm10638F6QEG2 257 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Znrf2Q71FD5 238 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Dock7Q8R1A4 2130 aaKnown RBP13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Crlf1Q9JM58 425 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Abca1P41233 2261 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Bex1Q9R224 128 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 P04940 107 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 P04941 107 aa13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 SonQ9QX47 2444 aaKnown RBP13.58□□□□□ -0.24
Usp48-201ENSMUST00000055131 Igkv4-57A0A0A6YYE7 117 aa13.57□□□□□ -0.24
Usp48-201ENSMUST00000055131 Prh1P05142 261 aa13.57□□□□□ -0.24
Usp48-201ENSMUST00000055131 Lage3Q9CR70 148 aa13.57□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ifitm1Q9D103 106 aa13.57□□□□□ -0.24
Usp48-201ENSMUST00000055131 Gm17455G3UW87 128 aa13.57□□□□□ -0.24
Usp48-201ENSMUST00000055131 Gm20481G3UXK4 153 aa13.57□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ss18l2Q9D174 77 aa13.57□□□□□ -0.24
Usp48-201ENSMUST00000055131 P01630 113 aa13.56□□□□□ -0.24
Usp48-201ENSMUST00000055131 Srsf2Q62093 221 aaKnown RBP13.56□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ighv1-77A0A0G2JGS9 117 aa13.56□□□□□ -0.24
Usp48-201ENSMUST00000055131 Tnrc6aQ3UHK8 1896 aaKnown RBP13.56□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ep300B2RWS6 2412 aa13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 P01750 117 aa13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 NpsP0C0P8 89 aa13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 MylkQ6PDN3 1941 aaKnown RBP13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 Cox11Q6P8I6 275 aa13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ndufa12Q7TMF3 145 aaKnown RBP13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 Med12A2AGH6 2190 aa13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 Trav9d-3A0A075B695 113 aa13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 Gm5941Q497P9 117 aa13.55□□□□□ -0.24
Usp48-201ENSMUST00000055131 Vwa8Q8CC88 1905 aa13.54□□□□□ -0.24
Usp48-201ENSMUST00000055131 Fam24aQ8CF27 98 aa13.54□□□□□ -0.24
Usp48-201ENSMUST00000055131 GfyJ3KML8 504 aa13.54□□□□□ -0.24
Usp48-201ENSMUST00000055131 Trav9n-2A0A0G2JDP3 113 aa13.54□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ighv1-52A0A0A6YXC3 117 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Nbl1Q61477 178 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Trav12d-3A0A075B6A4 115 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Trbv13-1A0A0B4J1P8 112 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Gm15093A2BI72 449 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms